Detailed information on CNT30154878


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000067, E-value = 7e-55

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30628927Prunus persicaVigna unguiculata71.5765.1884.11365forward
CNT30508904Prunus persicaSolanum lycopersicum88.6373.1479.2452forward
CNT30140910Prunus persicaLolium perenne58.6383.7579.93299forward
CNT30341750Prunus persicaEragrostis tef66.2762.3681.36338forward
CNT30366537Prunus persicaSorghum bicolor58.0433.9483.11296forward

Expression of CNT30154878

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MWDYMQVKSGCKQVMSGCKQVMLDCNLVKLDCNLEM*

Sequence

>CNT30154878
GCTTGGAGAGTATGCCGATGATGGACTGTATTTGGCTGACTGAGGATTGTAACTTGGAGATGTAGGGCTATAGCTGGGAGAAGTTGGACTATAACTAGGA
GAAGTTGGGCTGTAACCAGGAGAAGTTGGGCTGTAGGAGGGCGACGTTGGGCTGTAGGAAGGTGATGTAGGGCTATAGGAAGGCGATGTAGGGCTGTAGG
AAGGTGATGTGGGACTATATGCAGGTGAAGTCGGGCTGTAAGCAGGTGATGTCGGGCTGTAAGCAGGTGATGTTGGACTGTAACTTGGTGAAGTTGGACT
GTAACTTGGAGATGTAGGGCTGTAACTTGGAGATGTGGGGCTGTAACTTGGAGAAGTGGGGCTATAGCTGGGTGAGGTGGGTGAGTATGATGGACTTGTA
GGAGAATAGGCCGGACTGGTTGGACTATAACCTGGAGAACTAGGACTATAGGTTGGAGAGGTGGGACTGTACCCAGGAGAAGTGGGGCTGTACCCGGGCG
AGGTGGGACT