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Detailed information on CNT3035160


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316118Cucumis meloCorylus avellana77.1854.4881.75389forward
CNT30549269Cucumis meloIpomoea triloba42.6639.9682.33215forward
CNT30700558Cucumis meloQuercus lobata50.694.4483.53255forward
CNT30376889Cucumis meloArabidopsis thaliana48.617083.27245forward
CNT30269243Cucumis meloChenopodium quinoa44.0524.3784.68222forward
CNT30378927Cucumis meloManihot esculenta84.3368.6680.94425forward
CNT30403782Cucumis meloBeta vulgaris51.5962.281.92260forward
CNT30628702Cucumis meloVigna unguiculata46.4334.1681.62234forward
CNT30506120Cucumis meloNicotiana attenuata56.7548.8981.47286forward
CNT30591949Cucumis meloMusa acuminata61.5163.7980.97310forward
CNT3088002Cucumis meloVigna radiata35.5233.7782.68179forward
CNT30312132Cucumis meloCamelina sativa47.0236.5782.7237forward
CNT30140910Cucumis meloLolium perenne60.1284.8778.88303forward
CNT3017147Cucumis meloZea mays48.0233.8580.99242forward
CNT30607691Cucumis meloGossypium raimondii78.3758.3581.77395forward
CNT30205370Cucumis meloHelianthus annuus78.3760.4978.48395forward
CNT30713436Cucumis meloMalus domestica golden30.7548.1486.45155forward
CNT30350935Cucumis meloEragrostis tef53.3736.1681.78269forward
CNT30366570Cucumis meloSorghum bicolor70.0457.6879.6353forward
CNT30620243Cucumis meloCajanus cajan27.1841.2783.21137forward
CNT30354818Cucumis meloLactuca sativa54.5652.5880.73275forward
CNT30574023Cucumis meloVitis vinifera80.1672.6681.93404forward
CNT3027914Cucumis meloTheobroma cacao53.5790.381.85270forward
CNT30109704Cucumis meloOryza longistaminata44.6440.4780.44225forward
CNT30114394Cucumis meloFicus carica53.9745.7179.78272forward

Expression of CNT3035160

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MLERWGCTKVMWDCKTEMLGCRREMLGCRRVKLDCKQEKWGCSLGKWGCN*

Sequence

>CNT3035160
CTGTAATTGGGCGAGGTTGGGCTATATGGACTTGAAGGAGACAACCGTGGACTACTGGGTGAGTATGCCTGCGATGGGCTGTATTTAGCTGATTGAGGAT
TATAACTAGGTGAGGTTGGACTATAGCTAGGAGAAGTGGGGCTATAGCTTGGAGACGTGGGACTATAGCCAGGGGAGGTGGGGCTATATGCTGGAGAGGT
GGGGCTGTACGAAGGTGATGTGGGACTGTAAGACGGAGATGTTGGGCTGTAGGAGGGAGATGTTGGGCTGTAGGAGGGTGAAGTTGGACTGTAAGCAGGA
GAAGTGGGGCTGTAGCTTGGGGAAGTGGGGCTGTAACTAGGTGATGTGGGGCTGTAACTAGGAGAGGTGGGGCTGTAACTTGGAGAGGTTGGGCTGTAAC
TGGGAGAGGTGGGACTATAACCAGGAGATGTGGGACTATAGCCAGGGGATGATGGACTGTAGCCCGGAGACGATGGGCTATAGCCTGGAGATGACGTAGG
AGAG