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Detailed information on CNT30695034


BLAST search results

BLAST vs Swiss-Prot:
sp|P10707|CB2D_SOLLC, E-value = 2e-19

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671670Oryza sativaSetaria viridis11.8520.9597.3375forward
CNT30640430Oryza sativaNymphaea colorata31.7543.7987.56201forward
CNT3020107Oryza sativaCitrullus lanatus20.0611.184.25127forward
CNT30485914Oryza sativaOlea europaea22.7517.9883.33144forward
CNT30221234Oryza sativaHordeum vulgare26.0727.5596.36165forward
CNT30562752Oryza sativaActinidia chinensis21.1710.5989.55134forward
CNT30587569Oryza sativaMusa acuminata17.6933.4391.96112forward
CNT30244083Oryza sativaAvena sativa37.7648.7891.63239forward
CNT30132393Oryza sativaLolium perenne18.820.2797.48119forward
CNT3067780Oryza sativaLeersia perrieri19.2725.5297.54122forward
CNT30360911Oryza sativaLactuca sativa15.3221.3282.4797forward
CNT30428948Oryza sativaPapaver somniferum23.068.6780.82146forward
CNT30120689Oryza sativaCitrus clementina22.5912.5781.82143forward
CNT30102551Oryza sativaOryza rufipogon9162.299.83576forward
CNT30581265Oryza sativaEchinochloa crusgalli37.9146.0796.67240forward
CNT30604352Oryza sativaOryza punctata38.5542.3697.95244forward

Expression of CNT30695034

Peptides detected in this lncRNA

>peptide 1 (74 aa)
GDEEEADEEKVSKMVVWSGSLRWVAQLLRGPLPVAAACTAKPRKATMARRACLISASCSRSFFSGSDANPSGSK*

Sequence

>CNT30695034
CGGCGACGAGGAGGAGGCGGATGAGGAGAAGGTGTCGAAGATGGTGGTGTGGAGCGGGTCGCTGAGGTGGGTGGCCCAGTTGTTGAGGGGCCCCTTGCCG
GTGGCGGCGGCCTGCACGGCGAAGCCGAGGAAGGCGACCATGGCGAGGCGGGCGTGCTTGATCTCCGCCAGCTGCAGCCGCTCCTTCTTCTCCGGGTCCG
ACGCCAACCCGAGCGGGTCGAAGTAGGACCCCCCCGGGTACGACGACCCATCCACCAGCTCCACCTGAAAAACACCATCGGACCATTCCTACGTCAGTGT
CATCATCCTCGTCCGCGGCGCCGGCGATACGTAGTAACCAGGGTTTTAAATCTTTAGCTATAACTATTTAAAAAAAGATGTAGCAATTTGTTCTCATGTA
CAATTTAGTCATAGCTGCCACTATTTTGAGAGGCTAAACGCTAAATGTTTTAGCCCGCTAGCTATTTGAAACAATGGTAGTGAGAAACGCCCAGAGGTTT
TTCGGCTATCCCCACGGGCTAGACGACCTGGATTTGAAACCTTACTCTTTCTAATTATTTGATATAATAGGTCATTTTTTAATATTTGCTTTTTAAAAAA
AATGCTGGTAGTAATGTATGGGGGAGTATCGTG