Detailed information on CNT30686082


BLAST search results

BLAST vs Swiss-Prot:
sp|Q41630|ADT2_WHEAT, E-value = 2e-26

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691376Triticum urartuOryza sativa58.9223.0592.25142forward
CNT30670630Triticum urartuSetaria viridis58.9227.4790.14142forward
CNT30533522Triticum urartuEucalyptus grandis43.5738.0489.52105forward
CNT30618446Triticum urartuSesamum indicum39.423.8887.3795forward
CNT30402838Triticum urartuBeta vulgaris40.2511.6788.6697forward
CNT30488016Triticum urartuOlea europaea32.7822.8389.8779forward
CNT30162020Triticum urartuPistacia vera26.9729.8292.3165forward
CNT3088236Triticum urartuVigna radiata32.3715.9892.3178forward
CNT30539350Triticum urartuBrassica napus46.8917.392.04113forward
CNT30552540Triticum urartuOryza glaberrima52.713.1393.7127forward
CNT30441695Triticum urartuAegilops tauschii41.9132.999.01101forward
CNT30252935Triticum urartuAvena sativa46.4725.4597.32112forward
CNT30313064Triticum urartuCamelina sativa50.2115.5394.21121forward
CNT30140477Triticum urartuLolium perenne54.3623.3596.95131forward
CNT30606478Triticum urartuGossypium raimondii41.4947.1787100forward
CNT30216129Triticum urartuKalanchoe fedtschenkoi48.5519.5390.6117forward
CNT30355032Triticum urartuLactuca sativa40.2511.8685.5797forward
CNT30369687Triticum urartuOryza glumipatula41.4931.2595100forward
CNT30570934Triticum urartuVitis vinifera41.4930.388100forward
CNT3037332Triticum urartuCucumis melo42.7415.6888.35103forward
CNT30329515Triticum urartuDioscorea rotundata39.4212.4386.3295forward
CNT30150378Triticum urartuBrachypodium distachyon40.6618.5689.898forward
CNT30100415Triticum urartuOryza rufipogon58.9219.8692.25142forward
CNT30115985Triticum urartuOryza nivara29.4614.9595.7771forward
CNT30334024Triticum urartuCynara cardunculus48.1334.1290.52116forward
CNT3040169Triticum urartuMarchantia polymorpha40.6629.782.6598forward

Expression of CNT30686082

Peptides detected in this lncRNA

>peptide 1 (41 aa)
LESASEENGLQRIIQSKVQTTVDNDSNTRDVESTVKPSNTI*

Sequence

>CNT30686082
CTGGAGAGTGCCAGTGAGGAGAACGGGCTTCAGAGAATCATACAGTCCAAAGTACAGACCACGGTAGACAATGATTCCAACACAAGAGATGTTGAATCCA
CGGTAAAGCCCAGCAATACCATCTGACTTGAGAGTCTTGCGGAAGCACCAGCGGCACCACCAGAAGCAAGGTTGCCACCGAACCACTTCCAGTAACCATC
CTTGTCCTTCTTGAAGTTGAACATCCTCTTGAAGTAATCCT