Detailed information on CNT3040169


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30539350Marchantia polymorphaBrassica napus23.3311.7984.4277forward
CNT30552540Marchantia polymorphaOryza glaberrima23.037.8684.2176forward
CNT30441695Marchantia polymorphaAegilops tauschii23.6425.4184.6278forward
CNT30313064Marchantia polymorphaCamelina sativa26.6711.382.9588forward
CNT30140477Marchantia polymorphaLolium perenne29.717.4783.6798forward
CNT3041717Marchantia polymorphaChlamydomonas reinhardtii26.3632.8389.6687forward
CNT30686082Marchantia polymorphaTriticum urartu29.740.6682.6598forward
CNT30369687Marchantia polymorphaOryza glumipatula23.0323.7584.2176forward

Expression of CNT3040169

Peptides detected in this lncRNA

>peptide 1 (39 aa)
EENRLERVVDSEVETSVDDDADARDVESSVEPGDSIGAH*

>peptide 2 (30 aa)
MKLRLLLPRPDFLRTTSSSRPCPSCIRRAS*

Sequence

>CNT3040169
GTGAGGAGAACAGGCTTGAGAGAGTCGTAGATTCCGAAGTAGAGACCTCGGTAGACGACGATGCCGACGCACGAGATGTTGAATCCTCGGTAGAGCCCGG
CGATTCCATCGGAGCCCATTGAACTGGCGCTCACCGCCTCCCTTCTTGGCCGACTTGGAGTCGTTGGCCAGACGCGTCCGAGCGTAATCCAGCGAGTAGA
CGAACAGCAGCGATGAAGCTCCGGCTGCTCCTCCCGAGGCCAGATTTCCTGCGAACCACGTCCAGTAGCCGTCCTTGTCCTTCTTGTATCCGAAGAGCTT
CTTGAAGTAATCCTTGAAGGCGAAGTTCAG