Detailed information on CNT30402838


BLAST search results

BLAST vs Swiss-Prot:
sp|P27081|ADT2_SOLTU, E-value = 1e-50

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671299Beta vulgarisSetaria viridis10.5929.5385.2388forward
CNT30315326Beta vulgarisCorylus avellana12.1523.6585.15101forward
CNT30375890Beta vulgarisArabidopsis thaliana21.4245.6486.52178forward
CNT30488016Beta vulgarisOlea europaea11.1926.8886.0293forward
CNT30162003Beta vulgarisPistacia vera12.1521.2287.13101forward
CNT3089948Beta vulgarisSolanum tuberosum12.5222.4690.38104forward
CNT30441695Beta vulgarisAegilops tauschii13.4836.4889.29112forward
CNT30252935Beta vulgarisAvena sativa12.8824.3293.46107forward
CNT30606478Beta vulgarisGossypium raimondii14.3256.1392.44119forward
CNT30715150Beta vulgarisMalus domestica golden8.930.5890.5474forward
CNT30686082Beta vulgarisTriticum urartu11.6740.2588.6697forward
CNT30369687Beta vulgarisOryza glumipatula14.236.8888.98118forward
CNT30426944Beta vulgarisPapaver somniferum8.924.7590.5474forward
CNT30570934Beta vulgarisVitis vinifera11.6729.3993.8197forward
CNT30150378Beta vulgarisBrachypodium distachyon21.7834.2885.64181forward
CNT30175264Beta vulgarisVigna angularis12.7621.7785.85106forward
CNT30334024Beta vulgarisCynara cardunculus14.4435.2988.33120forward
CNT30725405Beta vulgarisLupinus angustifolius10.1124.6388.184forward

Expression of CNT30402838

Peptides detected in this lncRNA

>peptide 1 (46 aa)
EYIKTAHLLIPYHFPQKNKFSSTSTTEVVGGFRLKHHQNRTSFRRQ*

>peptide 2 (36 aa)
MACWVLQCSISVVSISKTPLNHSSVLETSITRLGDL*

>peptide 3 (41 aa)
MAKAAGPFSAGAYATTGAPMLETKDKSWVAWHAGFCNAALV*

Sequence

>CNT30402838
TCGAGTATATAAAAACTGCCCACCTCTTAATCCCATACCACTTCCCCCAAAAAAATAAATTTTCATCAACATCTACCACCGAAGTTGTCGGGGGCTTTAG
ACTTAAGCACCACCAGAACCGTACTTCTTTCCGAAGACAATGACCTGAAGCTTGTCATAACCGGCCAACACACCAGCACCAGCAACGGCACGAAGGATGT
TGGCACCAGCAGCACCACCAGAAGCCAAGTTACCAGCAAACCACTTCCAGTAACCATCTCTGTCCTTCTTGAAATTGAACAATCTCTTGAAGTAATCCTT
GAAGGCAAAGTTCAAGGCCTGGCAAAAAAAGTTAACATTTAATAATTGAAAACAGAAAAAATATCAGATATTTAAGCAGACAGAAGCAATCTAGAACAAA
AGGCACCTGAGTGGGGAAATAACGGATGACATTAGCAGTGTTTCCTCTCCACAAGGCAATCATACCCTCTTCGCCAACTGTTCTCTTAAAACAATCACCA
ATGCCCTTGTAAGCTTCACACGCTCAATTGGGGCAGCAGCAGTTTTTGATACGGCAGCTGAAACTCCTCCCATAAGAAAATCAATGGCAAAAGCAGCAGG
TCCTTTCTCAGCAGGAGCGTATGCAACAACAGGTGCACCGATGTTGGAGACGAAAGACAAATCCTGGGTAGCATGGCATGCTGGGTTCTGCAATGCAGCA
TTAGTGTAGTTTCCATAAGCAAAACGCCTCTGAACCATAGCAGTGTTTTGGAAACCTCCATAACGAGGCTGGGTGATTTGTGATAGGCCACTGGTGAGGT
GGAGTTGGCCAGCACCGGCCTTCTGCATAAC