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Detailed information on CNT30329515


BLAST search results

BLAST vs Swiss-Prot:
sp|O22342|ADT1_GOSHI, E-value = 6e-66

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30488016Dioscorea rotundataOlea europaea12.728.0388.6697forward
CNT30162003Dioscorea rotundataPistacia vera15.9725.6385.25122forward
CNT30441730Dioscorea rotundataAegilops tauschii31.2824.983.26239forward
CNT30253145Dioscorea rotundataAvena sativa23.8258.982.97182forward
CNT30314202Dioscorea rotundataCamelina sativa20.8140.2584.91159forward
CNT30606478Dioscorea rotundataGossypium raimondii15.5856.1388.24119forward
CNT30715236Dioscorea rotundataMalus domestica golden28.438.8981.11217forward
CNT30686082Dioscorea rotundataTriticum urartu12.4339.4286.3295forward
CNT30369687Dioscorea rotundataOryza glumipatula15.4536.8889.83118forward
CNT30426944Dioscorea rotundataPapaver somniferum30.577.9381.55233forward
CNT30572637Dioscorea rotundataVitis vinifera13.4850.4986.41103forward
CNT30334024Dioscorea rotundataCynara cardunculus10.3423.2489.8779forward
CNT30724403Dioscorea rotundataLupinus angustifolius17.1535.4187.02131forward

Expression of CNT30329515

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MRSFTRSMGAAAVLETAAETPPMRKSIAKLVKPFSAGAWAKTGETDGTIERSQVALYGCIKGFCSAPLT*

>peptide 2 (47 aa)
TGRTTGCQVACKPFPVPVLVFLEVEQPLEVIFECKVQRLEEITVKSN*

>peptide 3 (30 aa)
APAAPPDARLPANHFQYPSLSFLKLNSLLK*

Sequence

>CNT30329515
GCACCGGCCGCACCACCGGATGCCAGGTTGCCTGCAAACCATTTCCAGTACCCGTCCTTGTCTTTCTTGAAGTTGAACAGCCTCTTGAAGTAATCTTTGA
ATGCAAAGTTCAACGCCTGGAAGAAATAACAGTAAAAAGTAACTAAATTACAACATCAGCAAAGGTTGTATCATACATTGTATTTGTAACAACCAAACCA
AAACAAAAATAATAATGATGTGAAATATTCCAAATGAACCTTCAATGGAATTTTTATGTAGATGACAATTAAAGATGAATGAAAACTAAATAAAAGAAGA
AAAAGCTCCACAAGCAAAACTAACCTGTGTTGGGAAGTAACGGATAACGTTTGCTGTATTCCCCCTCCACAGTGAAGCAAAACCTTCATCCTTGATGGTG
CGAGCAAAGCAATCCGTGATTCCCTTGTAAGGCTCAGAAAGACGACCAGCCTTGATCATTTCATCCTGATTCTGGATGAGAAGCTTCACACGTTCAATGG
GAGCTGCAGCAGTTTTAGAAACAGCAGCAGAAACACCACCCATGAGAAAGTCTATAGCAAAGCTTGTGAAACCTTTCTCTGCAGGTGCATGGGCAAAGAC
AGGTGAGACCGATGGCACCATTGAAAGGTCACAGGTCGCCTTGTACGGCTGCATCAAAGGATTCTGCAGTGCCCCATTAACATAATTCCCAGTTGTGAAG
CGCCTTGCATACAGTGAAGGGGAATAAAAGCTTTGATTGCAAGCCTTCAAATCTCGGGAAAAGC