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Detailed information on CNT30691376


BLAST search results

BLAST vs Swiss-Prot:
sp|P31691|ADT_ORYSJ, E-value = 1e-82

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670630Oryza sativaSetaria viridis35.8842.7588.69221forward
CNT30533522Oryza sativaEucalyptus grandis30.1967.3982.8186forward
CNT30618446Oryza sativaSesamum indicum22.085.5586.76136forward
CNT30488016Oryza sativaOlea europaea32.9558.6784.24203forward
CNT30161998Oryza sativaPistacia vera36.6923.6979.65226forward
CNT3089948Oryza sativaSolanum tuberosum28.5738.0180.68176forward
CNT30225406Oryza sativaHordeum vulgare12.3434.786.8476forward
CNT3088236Oryza sativaVigna radiata21.5927.2584.21133forward
CNT30539350Oryza sativaBrassica napus25.1623.7487.1155forward
CNT30552540Oryza sativaOryza glaberrima35.8822.85100221forward
CNT30441695Oryza sativaAegilops tauschii29.0658.3191.62179forward
CNT30252935Oryza sativaAvena sativa33.647.0592.27207forward
CNT30313064Oryza sativaCamelina sativa30.0323.7585.41185forward
CNT30140477Oryza sativaLolium perenne37.1840.8291.7229forward
CNT30216129Oryza sativaKalanchoe fedtschenkoi20.6221.288.19127forward
CNT30647723Oryza sativaRosa chinensis9.5825.5493.2259forward
CNT30686082Oryza sativaTriticum urartu23.0558.9292.25142forward
CNT30722298Oryza sativaTriticum spelta28.4122.8291.43175forward
CNT30369687Oryza sativaOryza glumipatula16.7232.1999.03103forward
CNT30426981Oryza sativaPapaver somniferum25.9740.386.25160forward
CNT3037332Oryza sativaCucumis melo34.4232.2780.66212forward
CNT30150378Oryza sativaBrachypodium distachyon17.8620.8390.91110forward
CNT30100415Oryza sativaOryza rufipogon58.9350.7799.72363forward
CNT30115985Oryza sativaOryza nivara20.2926.3298.4125forward
CNT30334024Oryza sativaCynara cardunculus18.8334.1288.79116forward

Expression of CNT30691376

Peptides detected in this lncRNA

>peptide 1 (44 aa)
VIIFCQFRHRPSRTSFQRRGSAAGHSLRAHQHQQWHVGCWHQHP*

>peptide 2 (52 aa)
MKMLKNSSIDGQKTTNIETEIRTNLERPSEYNWLQRIIHSKVQTTVDNDSNT*

>peptide 3 (51 aa)
MARRMLAPAPLNSDLAPSFFRIWEKASMELLSSSSFCGRYQWGKRQDLHRW*

Sequence

>CNT30691376
GTCATCATTTTCTGCCAGTTTAGGCACCGCCCGAGCCGTACTTCTTTCCAAAGAAGAGGATCTGCAGCTGGTCATAGCCTGAGAGCACACCAGCACCAGC
AATGGCACGTAGGATGTTGGCACCAGCACCCTTGAACAGTGACTTGGCACCCTCGTTCTTCAGGATCTGGGAGAAAGCATCCATGGAGCTCTTGTCATCA
TCATCCTTCTGCGGACGGTATCAATGGGGTAAGAGGCAAGACCTGCACCGTTGGTGATCAGCCACCCAAGGGCAAAGCTTGCAAAGAAATTGTCCTGCAA
ACCAATGAAGATGTTAAAGAATAGTTCCATAGATGGGCAAAAAACAACTAATATTGAGACAGAAATAAGAACAAACCTGGAGAGACCCAGTGAGTACAAC
TGGCTTCAGAGAATCATACATTCCAAAGTACAGACCACGGTAGACAATGATTCCAACACATGAGATGTTAAATCCACGGTACAACCCAGCAATGCCATCT
GACTTGAGAGTCTTGCGGTAAACATCCACAAGGCCATTGAACTGCCTTTCACCTCCTCCCTTGGCAGCCTTCGCATCATTGGCCAACCTTGTCCTAGCAT
AGTCAAGGGAGTACAC