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Detailed information on CNT30369687


BLAST search results

BLAST vs Swiss-Prot:
sp|P31691|ADT_ORYSJ, E-value = 2e-60

BLAST vs NONCODE:
NONVVIT000715, E-value = 3e-34

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691376Oryza glumipatulaOryza sativa32.1916.7299.03103forward
CNT30670566Oryza glumipatulaSetaria viridis37.8124.1590.91121forward
CNT30533522Oryza glumipatulaEucalyptus grandis25.6229.7189.0282forward
CNT30375890Oryza glumipatulaArabidopsis thaliana24.0619.7484.4277forward
CNT30618446Oryza glumipatulaSesamum indicum67.818.8684.79217forward
CNT30402838Oryza glumipatulaBeta vulgaris36.8814.288.98118forward
CNT30488016Oryza glumipatulaOlea europaea59.6955.284.82191forward
CNT30162005Oryza glumipatulaPistacia vera31.878.5185.29102forward
CNT30539350Oryza glumipatulaBrassica napus48.1223.5885.71154forward
CNT30552540Oryza glumipatulaOryza glaberrima68.4422.6599.54219forward
CNT30441695Oryza glumipatulaAegilops tauschii66.5669.3892.49213forward
CNT30252935Oryza glumipatulaAvena sativa6547.2792.31208forward
CNT30313064Oryza glumipatulaCamelina sativa24.3810.0191.0378forward
CNT30140477Oryza glumipatulaLolium perenne65.3137.2591.87209forward
CNT30606478Oryza glumipatulaGossypium raimondii37.8157.0890.08121forward
CNT30216129Oryza glumipatulaKalanchoe fedtschenkoi2513.369080forward
CNT30686082Oryza glumipatulaTriticum urartu31.2541.4995100forward
CNT30355032Oryza glumipatulaLactuca sativa64.3825.1881.07206forward
CNT30432300Oryza glumipatulaPapaver somniferum22.1931.1487.3271reverse complement
CNT30572637Oryza glumipatulaVitis vinifera43.4468.1486.33139forward
CNT3037332Oryza glumipatulaCucumis melo67.8133.0384.79217forward
CNT30329515Oryza glumipatulaDioscorea rotundata36.8815.4589.83118forward
CNT30150378Oryza glumipatulaBrachypodium distachyon31.5619.1389.11101forward
CNT30100415Oryza glumipatulaOryza rufipogon32.1914.4199.03103forward
CNT30115985Oryza glumipatulaOryza nivara23.4415.7910075forward
CNT30334024Oryza glumipatulaCynara cardunculus29.0627.3590.3293forward
CNT3040169Oryza glumipatulaMarchantia polymorpha23.7523.0384.2176forward

Expression of CNT30369687

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MIPTHEMLNPRPLNCLSPPPLAAFASLANLVLA*

Sequence

>CNT30369687
CTGGAGAGACCCAGTGAGGACAACTGGCTTCAGAGAATCATACATTCCAAAGTACAGACCACGGTAGACAATGATTCCAACACATGAGATGTTAAATCCA
CGGCCATTGAACTGCCTTTCACCTCCTCCCTTGGCAGCCTTCGCATCATTGGCCAACCTTGTCCTAGCATAGTCAAGGGAGTACACAAAAAACAGAGATG
AAGCACCAGCAGCACCACCAGAGGCAAGGTTGCCACCAAACCACTTCCAGTAACCATCCTTGTCTTTCTTGAAGTTGAACAGCCTCTTGAAGTAATCCTT
GAATGCAAAGTTCAAAGCCT