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Detailed information on CNT30355032


BLAST search results

BLAST vs Swiss-Prot:
sp|O22342|ADT1_GOSHI, E-value = 7e-126

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670566Lactuca sativaSetaria viridis15.6525.5582.03128forward
CNT30533522Lactuca sativaEucalyptus grandis12.7137.6885.58104forward
CNT30618446Lactuca sativaSesamum indicum30.3210.1384.27248forward
CNT3020944Lactuca sativaCitrullus lanatus26.6552.482.11218forward
CNT30488016Lactuca sativaOlea europaea25.5560.486.12209forward
CNT30162003Lactuca sativaPistacia vera22.8639.2984.49187forward
CNT30539350Lactuca sativaBrassica napus27.0233.8486.43221forward
CNT30552540Lactuca sativaOryza glaberrima26.6522.5481.65218forward
CNT30441695Lactuca sativaAegilops tauschii26.6571.0179.82218forward
CNT30252935Lactuca sativaAvena sativa26.6549.5581.19218forward
CNT30314202Lactuca sativaCamelina sativa13.4527.8588.18110forward
CNT30140477Lactuca sativaLolium perenne26.6538.8681.19218forward
CNT3041636Lactuca sativaChlamydomonas reinhardtii8.072486.3666forward
CNT30606478Lactuca sativaGossypium raimondii16.0161.7987.02131forward
CNT30216129Lactuca sativaKalanchoe fedtschenkoi18.2224.8785.23149forward
CNT30715236Lactuca sativaMalus domestica golden27.2639.9682.06223forward
CNT30686082Lactuca sativaTriticum urartu11.8640.2585.5797forward
CNT30369687Lactuca sativaOryza glumipatula25.1864.3881.07206forward
CNT30426944Lactuca sativaPapaver somniferum28.7378.682.55235forward
CNT30570934Lactuca sativaVitis vinifera27.5168.1883.11225forward
CNT3058427Lactuca sativaAmborella trichopoda12.9635.3383.02106forward
CNT3037332Lactuca sativaCucumis melo25.1831.3587.38206forward
CNT30334024Lactuca sativaCynara cardunculus13.9433.5388.6114forward
CNT30724403Lactuca sativaLupinus angustifolius12.2227.0389100forward

Expression of CNT30355032

Peptides detected in this lncRNA

>peptide 1 (48 aa)
VKSSNSIRSKSLLVHINKTIELPFTSLLCSLGVISQTGSCIIKRVDKK*

>peptide 2 (41 aa)
MTLAVFPLHKDPKPSSLMVLLKHSPIPLYGFSNLPDLSISS*

>peptide 3 (76 aa)
MTELGAEMQHLSNFHIEIASGKVAAGLQSHEHEAVSCWIQEDRASGKHLGDVNDRSDFTFREREANEWIRVCCGSRK

Sequence

>CNT30355032
CGGTAAAGTCCAGCAACTCCATCAGAAGCAAGAGTCTTCTTGTACACATCAACAAGACCATTGAATTGCCTTTCACCTCCCTTCTTTGCAGCCTTGGCGT
CATTAGCCAAACGGGTTCTTGCATAATCAAGAGAGTAGACAAAAAGTAGGGAGGAGGCACCAGCGGCACCACCGGATCCCAAGTTTCCGGCGAACCATTT
CCAGTAGCCATCACGGTCCTTCTTGAAGTTGAACAGCCTCTTGAAGTAATCCTTAAAAGCAAAAATACTAGCCTGGGTTGGGAAATAACGAATGACATTA
GCAGTGTTTCCTCTCCACAAAGATCCGAAACCTTCTTCCTTAATGGTTCTGCTAAAGCATTCACCGATACCTTTGTATGGTTTCTCCAACCTACCAGACT
TAAGCATCTCATCCTGATTCTGGATCAAAAGCTTCACACGTTCAATGGGTGCAGCAGCTGTTTTTGACACAGCAGCAGAGACACCACCCATGAGAAAATC
AATAGCAAACCCTTGAAGACCTTTCTCAGCTGGGGCTTGAACACAGATCGGTGATACTTTTGGCACAATCATGGAAAGTTCAGCTGATGACTGAGTTGGG
TGCTGAAATGCAGCATTTGAGTAATTTCCATATTGAAATTGCCTCTGGTAAAGTGGCTGCTGGACTCCAGTCTCACGAGCACGAAGCTGTGTCATGCTGG
ATCCAAGAAGACCGAGCTTCTGGGAAACACTTGGGTGATGTGAATGATCGATCGGATTTTACCTTTCGAGAGAGAGAAGCGAATGAATGGATCCGCGTAT
GCTGCGGCTCCAGAAAAG