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Detailed information on CNT30570934


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671299Vitis viniferaSetaria viridis29.732.8985.7198forward
CNT30315326Vitis viniferaCorylus avellana31.5224.3690.38104forward
CNT30375890Vitis viniferaArabidopsis thaliana25.1521.2893.9883forward
CNT30618446Vitis viniferaSesamum indicum66.068.984.86218forward
CNT30402838Vitis viniferaBeta vulgaris29.3911.6793.8197forward
CNT30162020Vitis viniferaPistacia vera18.1827.5293.3360forward
CNT3085275Vitis viniferaVigna radiata30.6116.3488.12101forward
CNT30539350Vitis viniferaBrassica napus43.3321.990.21143forward
CNT30552540Vitis viniferaOryza glaberrima40.313.7586.47133forward
CNT30441695Vitis viniferaAegilops tauschii40.343.3284.96133forward
CNT30252935Vitis viniferaAvena sativa30.322.7391100forward
CNT30313064Vitis viniferaCamelina sativa34.2414.5188.5113forward
CNT30140477Vitis viniferaLolium perenne68.1840.1183.11225forward
CNT30216129Vitis viniferaKalanchoe fedtschenkoi47.2726.0486.54156forward
CNT30647723Vitis viniferaRosa chinensis32.4246.3287.85107forward
CNT30686082Vitis viniferaTriticum urartu30.341.4988100forward
CNT30355032Vitis viniferaLactuca sativa68.1827.5183.11225forward
CNT30706971Vitis viniferaPrunus avium32.4211.7588.79107forward
CNT3037332Vitis viniferaCucumis melo67.5833.9484.75223forward
CNT30150378Vitis viniferaBrachypodium distachyon29.718.5689.898forward
CNT3049292Vitis viniferaCucumis sativus28.1814.7486.0293forward

Expression of CNT30570934

Peptides detected in this lncRNA

>peptide 1 (66 aa)
MHPRNSCTSRLHLMSSSFFCGLCQLDRSLSVDINQAIELPVSSSFLCSFCIICKTGSGIIKGIDKE*

Sequence

>CNT30570934
CCCTCATTCTTAAGGATCTGATTGAATGCATCCAAGGAACTCTTGTACTTCACGGCTTCACCTGATGTCATCATCATTCTTCTGCGGACTGTGTCAATTG
GATAGGAGTCTTTCTGTAGACATCAACCAAGCCATTGAATTGCCTGTCTCCTCCTCCTTTCTTTGCAGCTTTTGCATCATTTGCAAGACGGGTTCGGGCA
TAATCAAGGGAATAGACAAAGAGTAGGGAAGAAGCACCAGCAGCACCACCAGATGCCAAGTTACCAGCAAACCACTTCCAGTAACCATCCCTGTCCTTCT
TAAAGTTGAACAGTCTCTTAAAGTAATCCT