Detailed information on CNT30684136


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692506Triticum urartuOryza sativa35.9443.0690.32124forward
CNT30522047Triticum urartuSetaria italica71.5980.7282.59247forward
CNT30297669Triticum urartuTriticum aestivum89.28100.6592.21308forward
CNT30223410Triticum urartuHordeum vulgare77.3986.6991.76267forward
CNT30391813Triticum urartuTriticum turgidum90.1499.0496.14311reverse complement
CNT30553207Triticum urartuOryza glaberrima78.8487.1883.82272forward
CNT30442760Triticum urartuAegilops tauschii77.3987.8393.63267forward
CNT30663261Triticum urartuTriticum dicoccoides84.0695.3992.41290forward
CNT30130300Triticum urartuLolium perenne19.1322.8495.4566reverse complement
CNT3015504Triticum urartuZea mays75.0742.8184.17259forward
CNT3066721Triticum urartuLeersia perrieri23.1925.5697.580forward
CNT30361461Triticum urartuSorghum bicolor76.2385.3985.93263forward
CNT30596008Triticum urartuOryza meridionalis78.2687.3884.07270forward
CNT30369785Triticum urartuOryza glumipatula79.4270.2684.31274reverse complement
CNT30100969Triticum urartuOryza rufipogon78.8489.1884.93272forward
CNT30574593Triticum urartuOryza barthii61.1667.6384.36211forward
CNT30115932Triticum urartuOryza nivara78.5589.1485.24271forward
CNT30603809Triticum urartuOryza punctata89.86100.9884.52310forward
CNT30550736Triticum urartuOryza brachyantha74.283.1284.38256forward

Expression of CNT30684136

Peptides detected in this lncRNA

>peptide 1 (33 aa)
LASPSSVTGACHPCGGIEVVWMFGAVSWPGLVM*

Sequence

>CNT30684136
CTAGCATCGCCGAGCTCAGTCACGGGAGCTTGTCACCCATGTGGGGGCATTGAGGTGGTGTGGATGTTTGGTGCGGTTTCTTGGCCTGGGCTTGTGATGT
AACTTTGCTGGCCTGCCCGTTCCAAGTTGGTAGTGGGCTGGGTGGCTGGGGCGAAAGCTTCGGCCTCTCAGGCCCTGAAGTGGCAGGCACCACGTTAGGC
TGGTTTCACAGAGCAGCGTTCACTGCCCGCTTCCAACGGTGGAAGGATAACAGGCCGCTGCAGCATGGGCCCACTATTGGCCTAGGACCCCTCCATAAAC
AGACCACCATCTTTTTTAGTTGAATATATACTTTAAATTTTTTTA