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Detailed information on CNT30369785


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30521685Oryza glumipatulaSetaria italica71.5490.5884.23279reverse complement
CNT30379183Oryza glumipatulaManihot esculenta16.1522.1890.4863forward
CNT30185797Oryza glumipatulaSecale cereale21.2834.1693.9883reverse complement
CNT30308216Oryza glumipatulaTriticum aestivum7089.884.25273reverse complement
CNT30391813Oryza glumipatulaTriticum turgidum24.3630.2592.6395forward
CNT30442760Oryza glumipatulaAegilops tauschii7089.884.62273reverse complement
CNT30445279Oryza glumipatulaSaccharum spontaneum39.7426.5485.81155forward
CNT30130870Oryza glumipatulaLolium perenne18.7231.8891.7873reverse complement
CNT3015504Oryza glumipatulaZea mays20.7713.3996.381reverse complement
CNT30684136Oryza glumipatulaTriticum urartu70.2679.4284.31274reverse complement
CNT30368288Oryza glumipatulaSorghum bicolor21.7921.5795.2985reverse complement

Expression of CNT30369785

Peptides detected in this lncRNA

>peptide 1 (66 aa)
MVSTLQPISGPMVQRPVILPPLEASSDRCSVKPASRRACHSGAGETPRLSPKPLPPTTQLGTGKPA*

Sequence

>CNT30369785
GTTGATTTTTCTATCGATATATTATTGATTCGTTCTCTACAGTTTGCTGTTAAATTTATATTGTAAATACGACACATGCGAAAGTAAAATGGTTTCTACC
CTGCAACCGATAAGCGGGCCCATGGTGCAGCGGCCTGTTATCCTTCCACCGTTGGAAGCGAGCAGTGATCGCTGCTCTGTGAAGCCAGCCTCACGCCGTG
CCTGCCATTCAGGGGCCGGAGAGACCCCAAGGCTTTCGCCGAAGCCCCTCCCACCCACTACTCAACTTGGAACGGGCAAGCCAGCATAGTTAAACAACAC
ATGGACCCAAGCCCAAATTCAGCACCAACCATCCACACCACCTGATGCCCCCACATGGGTTACAAGCTCTCGCTACTGAGCTCGGCGGTG