Detailed information on CNT30591655


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30381739Musa acuminataManihot esculenta52.7315.9383.62116forward
CNT30630063Musa acuminataVigna unguiculata29.551190.7765forward
CNT30568743Musa acuminataActinidia chinensis30.4521.4788.0667forward
CNT30510893Musa acuminataSolanum lycopersicum8085.8586.36176forward
CNT30145283Musa acuminataMedicago truncatula25.9116.6287.7257forward
CNT30625375Musa acuminataDaucus carota52.735081.9116forward

Expression of CNT30591655

Peptides detected in this lncRNA

>peptide 1 (72 aa)
VGIILQGVLRLDFLLVLLVLPLVLLRLLNHLLNLSLAQPPLVVADGDLGDSPGSRGNARQLKFTEEVVVPGSC

>peptide 2 (46 aa)
CRNNSPRRSSPRFSSCAPRPPPCTSPPPEPSSQSLPCSASPCRCRR*

Sequence

>CNT30591655
TGTAGGAATAATTCTCCAAGGCGTTCTTCGCCTCGATTTTCTTCTTGTGCTCCTCGTCCTCCCCCTTGTACTTCTCCGCCTCCTGAACCATCTTCTCAAT
CTCTCCCTTGCTCAGCCTCCCCTTGTCGTTGCAGACGGTGATCTGGGGGACTCCCCTGGGAGCAGGGGGAATGCCCGACAGCTCAAATTTACCGAGGAGG
TTGTTGTCCCTGGTTCTTGT