Detailed information on CNT30367015


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675796Sorghum bicolorSetaria viridis37.2548.4994.26209forward
CNT3043869Sorghum bicolorPrunus dulcis20.522.7382.61115forward
CNT302051Sorghum bicolorZea mays18.3645.3797.09103forward
CNT30371090Sorghum bicolorOryza glumipatula17.2920.1291.7597forward
CNT30149623Sorghum bicolorBrachypodium distachyon24.7828.9685.61139forward
CNT30594767Sorghum bicolorEragrostis curvula11.2324.4292.0663forward

Expression of CNT30367015

Peptides detected in this lncRNA

>peptide 1 (97 aa)
MSVSASGASSSSMLRPSLSMRWMRLPKVLMMSESSWLISAWKANVSVSEAMAGETTFPDARRARRAGGGGGLRAEEKCTRRGFVGRRDGTREGAERWG

Sequence

>CNT30367015
GATCGAGGAAAACAACAAAAAATTAAAATAATTGAAAGACAGCAGGATAAACGGATAATAGCAGCACTATTATACCAACATTAACGTACTTAGTTCGATA
ACACACGCATCCAGCCCCAGCCCCATTACATTGCAGGCTAGCAAAAGTAAACCACACAAAATAAACCGAGATGTTCAGACACGCTCTTCAGCCGGGACAC
AGGGTACCCCAGGCTTAGTCGACCTCCTCCATCTTGCTCTCGCCGGCGTCGTCCTCCAGAGGGGGCATGTCAGTGTCAGCCTCCGGGGCCTCGTCCTCGT
CAATGCTCAGGCCCAGCTTGAGCATGCGGTGGATGCGGCTGCCGAAGGTGTTGATGATGAGCGAGAGCAGCTGGTTGATCTCCGCCTGGAAGGCGAACGT
CTCCGTCTCCGAGGCCATGGCTGGCGAGACGACCTTCCCGGACGCTAGGAGAGCGCGGCGAGCAGGCGGCGGCGGCGGCTTGAGGGCAGAGGAGAAGTGC
ACGAGACGAGGGTTTGTGGGACGACGAGATGGGACTCGGGAGGGTGCGGAGCGGTGGGGAT