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Detailed information on CNT3057481


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315736Amborella trichopodaCorylus avellana21.5927.9488.1676forward
CNT30632354Amborella trichopodaVigna unguiculata36.658.9186.82129forward
CNT30199286Amborella trichopodaPisum sativum36.3618.0584.38128forward
CNT30504292Amborella trichopodaNicotiana attenuata37.787.4686.47133forward
CNT3090412Amborella trichopodaSolanum tuberosum36.085.7585.04127forward
CNT30193370Amborella trichopodaSecale cereale37.228.1184.73131forward
CNT30286546Amborella trichopodaTriticum aestivum37.228.8384.73131forward
CNT30543576Amborella trichopodaBrassica napus37.2211.4385.5131forward
CNT30553968Amborella trichopodaOryza glaberrima36.366.7985.94128forward
CNT30439089Amborella trichopodaAegilops tauschii37.228.0683.97131forward
CNT30655369Amborella trichopodaRosa chinensis37.54.5788.64132forward
CNT30210627Amborella trichopodaHelianthus annuus36.3610.8787.5128forward
CNT30679835Amborella trichopodaTriticum urartu26.77.3387.2394forward
CNT30595910Amborella trichopodaOryza meridionalis26.9931.7788.4295forward
CNT3035458Amborella trichopodaCucumis melo25.284.8394.3889forward
CNT30499024Amborella trichopodaDigitaria exilis36.368.4185.16128forward
CNT30117031Amborella trichopodaOryza nivara26.995.1688.4295forward

Expression of CNT3057481

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MFHVLWSIEPLQRSLQVSRFSVKKYCACCKL*

Sequence

>CNT3057481
CATAACCAGAAATATAGGCAAATTCAGCTGATAAGTGATGGGTACATGGTTGGCCAATAGCAAGCATCCTTCCAAGTACTAAATGTTTCATGTGCTATGG
AGTATAGAACCTTTACAAAGATCACTACAAGTCTCAAGGTTTAGCGTAAAGAAATATTGTGCATGTTGTAAACTATAAAAACGGGGGTAGATTGGCCCAC
ACTAGAACTTCCACTACCCAGGGCGATCCTATTATAGGGATAGCCTCAGGCACGCCGGTCACCATTTTGACTGCCTAATAACCAATTTGGTCCCGAGGTA
AGGAATAATCAGTTACACCAAAAGATGTAGTCAATACAGCCAGAACCACACC