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Detailed information on CNT30679835


BLAST search results

BLAST vs Swiss-Prot:
sp|A1EA38|CYB6_AGRST, E-value = 1e-105

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315736Triticum urartuCorylus avellana19.3391.1885.48248forward
CNT30618210Triticum urartuSesamum indicum6.7842.0388.5187reverse complement
CNT30730483Triticum urartuCorchorus capsularis11.2232.6587.5144forward
CNT30401838Triticum urartuBeta vulgaris11.6138.883.89149forward
CNT30632354Triticum urartuVigna unguiculata34.6130.6688.06444forward
CNT30199319Triticum urartuPisum sativum20.1112.8289.92258forward
CNT30504292Triticum urartuNicotiana attenuata35.725.6788.65458forward
CNT30708642Triticum urartuGlycine max8.7323.4887.5112forward
CNT3090412Triticum urartuSolanum tuberosum27.5916.0385.88354forward
CNT30193370Triticum urartuSecale cereale59.8647.5597.01768forward
CNT30286546Triticum urartuTriticum aestivum59.9451.8597.14769forward
CNT30395700Triticum urartuTriticum turgidum36.0999.7896.11463forward
CNT30543576Triticum urartuBrassica napus35.6239.8888.84457forward
CNT30145111Triticum urartuMedicago truncatula7.6421.9288.7898forward
CNT30439089Triticum urartuAegilops tauschii59.8647.2397.27768forward
CNT30662532Triticum urartuTriticum dicoccoides31.859.2295.83408forward
CNT30309624Triticum urartuCamelina sativa8.7326.5489.29112forward
CNT30230643Triticum urartuAnanas comosus13.4122.7594.19172forward
CNT30655369Triticum urartuRosa chinensis36.011687.66462forward
CNT30210627Triticum urartuHelianthus annuus34.6137.6990.54444forward
CNT30622073Triticum urartuCajanus cajan9.6630.9290.32124forward
CNT30595910Triticum urartuOryza meridionalis23.310094.31299forward
CNT30357898Triticum urartuLactuca sativa58.1437.3785.39746forward
CNT30422352Triticum urartuPapaver somniferum17.1526.2891.36220forward
CNT30574487Triticum urartuVitis vinifera11.0723.0184.51142forward
CNT3057481Triticum urartuAmborella trichopoda7.3326.787.2394forward
CNT3035458Triticum urartuCucumis melo35.724.8488.65458forward
CNT30104480Triticum urartuOryza rufipogon8.7322.0991.96112forward
CNT30117031Triticum urartuOryza nivara55.3438.5592.54710forward
CNT30556546Triticum urartuPanicum hallii21.2871.2887.91273forward

Expression of CNT30679835

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MICLSYKGPKIPCLRIIGKCININTAVSKGSTKVCKL*

>peptide 2 (60 aa)
MIDRNIANKATVIPIKGVVPQPGATFPYSEFKGFSKLPAPVRFVLGLEISSTVCVAIDSI*

Sequence

>CNT30679835
AAAATATATAAAAGATCGCTGGGCCATGCGGGTTCCCCGTAATAATTATTTCACATCCCTTTAGCTAATTTAGCTCTTAATACAGGATCATTTAAGTCTG
CTTTCTTTGTTACTCCCATAATCCGCCTTTTTTCTTTCGTAAAATTAACTTCAACTATTTGTATTGTATAAAAATACTTTGGAGTTGAAGAGAAGTATCC
AAATGACATGTGTTATTTTACAATAACCCATGCTTGTAGCAATGAAATACCAAAACCTACCCGATATGATAATTATAATTCTCTATGATATGCCTTTCCT
ATAAAGGACCCAAAATACCTTGCTTACGTATCATTGGAAAGTGCATTAACATAAATACGGCAGTAAGCAAAGGCAGTACAAAGGTATGTAAACTATAAAA
ACGAGTCAAAGTGGATTGGCCCACACTAGCACTTCCGCGTAATAACTCCACTAAAGGCGATCCTATTACCGGAATGGCGTCAAGTACACCTATCACAATT
TTGACTGCCCAATAGCCAATTTGATCCCAAGGCAAAGAATAACCAGTTACACCAAATGATGCAGTCAAAACAGCCAAAACCACACCTGTGACCCAAGTTA
ATTCGCGGGGTTTTTTAAATCCCCCTGTGAGATACACACGAAATACATGCAGGATCATCATTAAAACCATCATACTTGCTGACCATCGATGAACTGATCG
GATTAACCAACCAAAGTTGGCCTCGGTCATTATGTATTGAACCGAGGAAAAAGCCTATGTAGTAAAACCGGTAGCGACTTGTACTAGAAAACAAGTGTAA
TTCCCCCTAAACAATAAAATATGTTGACACGGGGAGGAACATATTTACTAGTTATATCATCTGCAATTGCCTGAATCTCAAGACGTTACTCAAACCAATC
ATATACTTTACTCATATTCCACAGATACCGAAACAAAAAAATCCGTGGTCGAACTACCATAATATCTAGAAATGTAGATCTTAAACTAGAAAGGCTTTTT
TGGATGGAAAAACTCTGACTTCCTAGTTTTAGTTAGTAGAAACCTAATTGGTTAAAATTCCATCCAGTAAAACGGAAGAATTATAAATTTCTAAAATGAT
AGATAGGAATATAGCGAATAAAGCCACTGTGATCCCCATAAAAGGAGTAGTCCCCCAACCCGGGGCGACTTTCCCATATTCCGAATTCAAGGGTTTCAGT
AAACTACCTGCACCAGTTCGTTTTGTCCTAGGTTTAGAAATATCTTCAACGGTTTGTGTAGCCATAGATTCTATTTAATCATT