Detailed information on CNT30315736


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30632354Corylus avellanaVigna unguiculata99.6318.7287.45271forward
CNT30199319Corylus avellanaPisum sativum96.3213.0287.79262forward
CNT30504292Corylus avellanaNicotiana attenuata90.4413.7989.02246forward
CNT3090412Corylus avellanaSolanum tuberosum52.946.5286.11144forward
CNT30193370Corylus avellanaSecale cereale91.1815.3685.89248forward
CNT30286546Corylus avellanaTriticum aestivum86.7615.9185.59236forward
CNT30543576Corylus avellanaBrassica napus96.3222.8688.55262forward
CNT30553968Corylus avellanaOryza glaberrima91.1813.1586.29248forward
CNT30439089Corylus avellanaAegilops tauschii91.1815.2585.48248forward
CNT30667320Corylus avellanaTriticum dicoccoides52.5723.9185.31143forward
CNT30230643Corylus avellanaAnanas comosus57.7220.7787.26157forward
CNT30655369Corylus avellanaRosa chinensis97.799.2190.23266forward
CNT30210627Corylus avellanaHelianthus annuus96.3222.2487.4262forward
CNT30679835Corylus avellanaTriticum urartu91.1819.3385.48248forward
CNT30595910Corylus avellanaOryza meridionalis7568.2387.25204forward
CNT30357898Corylus avellanaLactuca sativa96.3213.1388.93262forward
CNT30422352Corylus avellanaPapaver somniferum80.1526.0587.16218forward
CNT3057481Corylus avellanaAmborella trichopoda27.9421.5988.1676forward
CNT3035458Corylus avellanaCucumis melo96.3214.2190.08262forward
CNT30499024Corylus avellanaDigitaria exilis91.1816.2985.89248forward
CNT30117031Corylus avellanaOryza nivara91.1813.4687.1248forward

Expression of CNT30315736

Peptides detected in this lncRNA

>peptide 1 (35 aa)
VGPLQFLLPNNQFDPEARNNQSHQKMLSTQLEPHL*

Sequence

>CNT30315736
TGGTAGGCCCGTTACAATTTTTATTACCCAATAACCAATTTGATCCCGAGGCAAGGAATAACCAGTCACACCAAAAGATGCTGTCAACCCAGCTAGAACC
ACACCTGTAACCCAAGTCAATTCACGAGGTTTTTTAAAACCACCGGTGAGATACATGCGAAATACGTGCAAGATCATTATTAGGACCATCATACTTGTAG
ACCATTGATGAACTGATCGGATTAACCAACCAAATTTCGCTTCTATCATTATATATTGAACAGAAGCAAAAG