Detailed information on CNT30554984


BLAST search results

BLAST vs Swiss-Prot:
sp|P12330|CB21_ORYSJ, E-value = 3e-121

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696274Oryza glaberrimaOryza sativa77.8589.5699.54875forward
CNT30629403Oryza glaberrimaVigna unguiculata42.8866.9486.31482forward
CNT30299998Oryza glaberrimaTriticum aestivum53.1158.8291.62597forward
CNT30587514Oryza glaberrimaMusa acuminata49.0266.2387.3551forward
CNT30440655Oryza glaberrimaAegilops tauschii53.4760.191.51601forward
CNT30251114Oryza glaberrimaAvena sativa53.5657.6189.37602forward
CNT30665158Oryza glaberrimaTriticum dicoccoides53.1162.3292.8597forward
CNT30471514Oryza glaberrimaSaccharum spontaneum53.6571.791.04603forward
CNT3011490Oryza glaberrimaZea mays53.7467.4190.56604forward
CNT30129909Oryza glaberrimaCorymbia citriodora48.0474.2888.7540forward
CNT30684955Oryza glaberrimaTriticum urartu53.4760.5890.85601forward
CNT30363113Oryza glaberrimaSorghum bicolor47.6954.4289.74536forward
CNT30596906Oryza glaberrimaOryza meridionalis49.9157.397.15561forward
CNT30103465Oryza glaberrimaOryza rufipogon91.7390.0498.551031forward
CNT30577669Oryza glaberrimaOryza barthii55.8766.8899.52628forward
CNT30582730Oryza glaberrimaEchinochloa crusgalli54.6338.7688.76614forward
CNT30117623Oryza glaberrimaOryza nivara80.3494.7598.34903forward
CNT30603498Oryza glaberrimaOryza punctata47.4257.9392.5533forward

Expression of CNT30554984

Peptides detected in this lncRNA

>peptide 1 (57 aa)
NQRIHYLPRFDPIYCIRKFKVLINPSMPQYKQFNYIFTLYIARNGYILGSREYLFLI*

>peptide 2 (42 aa)
MAWTKKPNMENMARRPFLISFTLSSANASGSSARPSGLGLPR*

Sequence

>CNT30554984
TAAATCAGAGGATCCATTATCTTCCTAGATTCGACCCAATCTATTGTATACGTAAATTTAAAGTACTAATTAATCCTTCCATGCCACAATATAAACAATT
TAACTACATATTTACACTATACATAGCCAGAAATGGTTATATTTTGGGATCGAGGGAGTATTTGTTTCTGATCTAATAGAGATGAGAAATCCGCTAATCA
GAATAACACCACGGATAAGTACCTAGACCATTAGTTGGGAAACAAATAAAATCATTATTGCAAAAACATCATCTTCTTCTTCATCTTCTTAGTGTACACA
ACACCAACTCGATCATCATCTCGTCGCACTAAACCCATCTTCCCCAACCCAAAGACAACGAACTCGCTGGCCACAAATCCATCCAACCACAATTAACCAC
TGCTAAGCTACGGTGCCCCACTTCACTTGCCGGGGACGAAGTTGGTGGCGTACGCCCAGGCGTTGTTGTTGACGGGGTCGGCGAGGTGGTCGGCGAGGTT
CTCGAGGGGGCCCTTGCCGGTGACGATGGCCTGGACGAAGAAGCCGAACATGGAGAACATGGCGAGGCGGCCGTTCTTGATCTCCTTCACCTTGAGCTCC
GCGAACGCCTCGGGGTCGTCGGCGAGGCCGAGCGGGCTCGGGTTGCCGAGGTAGTCGAGCCCGCCCTCGCTGAAGATCTGCGAGCCCGCCTTGAACCACA
CGGCCTCGCCGAACTTGACGCCGTTCCGGGCGAGGAGCTCCGGGAAGACGCAGCCGAGCGCGCCCAGCATCGCCCACCGGGAGTGGATCACCTCCAGCTC
CCGGTTCTTGGCGAACGTCTCCGGGTCGGCGGAGAGCCCCGCGGTGTCCCACCCGTAGTCGCCCGGGAACTCGCCGGTGAGGTAGCTCGGCGGCTCGCCG
GAGAGCGGGCCGAGGTAGAGGACGCGGTCGGCGCCGTACCACGGGCTCCCCGACGACGCCGCCGGCTTGGGCTTCGCGGCGGTCTTGCGCATGGTGATCC
GCGCCTCGCCGAAGAGCGCGGAGGAGAGCGCCATGGTGGCCGCGGCCATTGATGCAGTGAGCTGTGAGAGCTGAGAGAGATGGCGATGAGCGAGCGAGTG
TGAGTTGGGAGTTGGAGATGGCGC