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Detailed information on CNT30129909


BLAST search results

BLAST vs Swiss-Prot:
sp|P27493|CB22_TOBAC, E-value = 2e-140

BLAST vs NONCODE:
NONBNAT007398, E-value = 1e-66

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696274Corymbia citriodoraOryza sativa74.2855.2788.52540forward
CNT30671996Corymbia citriodoraSetaria viridis41.9543.5191.48305forward
CNT30522354Corymbia citriodoraSetaria italica67.1348.2285.86488forward
CNT30534267Corymbia citriodoraEucalyptus grandis87.963.3986.85639forward
CNT30524999Corymbia citriodoraPhaseolus vulgaris7499.4583.83538forward
CNT30629403Corymbia citriodoraVigna unguiculata79.0979.8684.52575forward
CNT30709832Corymbia citriodoraGlycine max81.1664.9184.24590forward
CNT30299998Corymbia citriodoraTriticum aestivum745388.66538forward
CNT30393441Corymbia citriodoraTriticum turgidum72.2166.9688.19525forward
CNT30587514Corymbia citriodoraMusa acuminata42.3737.0289.94308forward
CNT30554984Corymbia citriodoraOryza glaberrima74.2848.0488.7540forward
CNT30440655Corymbia citriodoraAegilops tauschii7453.889.03538forward
CNT30251114Corymbia citriodoraAvena sativa75.152.2590.84546forward
CNT30665325Corymbia citriodoraTriticum dicoccoides7461.9191.82538forward
CNT30472624Corymbia citriodoraSaccharum spontaneum73.8766.4690.32537forward
CNT3011490Corymbia citriodoraZea mays74.8360.7190.07544forward
CNT30684955Corymbia citriodoraTriticum urartu7454.2389.03538forward
CNT30720168Corymbia citriodoraTriticum spelta35.3585.9593257forward
CNT30345519Corymbia citriodoraEragrostis tef47.1859.1493343forward
CNT30363113Corymbia citriodoraSorghum bicolor66.1648.8389.4481forward
CNT30621216Corymbia citriodoraCajanus cajan51.7249.2889.63376forward
CNT30596906Corymbia citriodoraOryza meridionalis74.8355.5788.79544forward
CNT3055205Corymbia citriodoraAmborella trichopoda75.7962.3383.48551forward
CNT30150713Corymbia citriodoraBrachypodium distachyon46.9158.3989.74341forward
CNT30103465Corymbia citriodoraOryza rufipogon74.2847.1687.78540forward
CNT30581184Corymbia citriodoraEchinochloa crusgalli74.8361.0591.54544forward
CNT30117623Corymbia citriodoraOryza nivara74.2856.6687.78540forward
CNT30603498Corymbia citriodoraOryza punctata65.4751.7488.45476forward
CNT30556492Corymbia citriodoraPanicum hallii68.2354.0989.11496forward

Expression of CNT30129909

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAHRQWITSSSRFLAKVSGSAESPAVSHP*

>peptide 2 (29 aa)
HKVNFAVNLHKDEETTRIVTTKRPPRRPT*

>peptide 3 (37 aa)
MRKQQESSQQKDLLVVRHKTPLTFRERSWWRRPRRCC*

>peptide 4 (46 aa)
MACTKNPNMENMARRPFLISFTLSSAKASGSSARMLWAWIRLGFPR*

Sequence

>CNT30129909
CCATAAAGTAAATTTTGCAGTGAATTTACACAAAGATGAGGAAACAACAAGAATCGTCACAACAAAAAGACCTCCTCGTCGTCCGACATAAGACACCTCT
CACTTTCCGGGAACGAAGTTGGTGGCGTAGGCCCAGGCGTTGTTGTTAACGGGGTCGGCGAGGTGGTCGGCGAGGTTCTCCAGCGGCCCCTTTCCGGTCA
CGATGGCCTGCACGAAGAACCCGAACATGGAGAACATGGCGAGGCGGCCGTTCTTGATCTCCTTCACCTTGAGCTCCGCGAAGGCCTCGGGGTCGTCGGC
GAGGATGCTCTGGGCGTGGATCAGGCTAGGGTTTCCGAGGTAGTCGAGGCCGCCCTCGCTGAAGATCTGGGCGCCGGCCTTGAACCACACCGCCTCGCCG
AACTTGACGCCGTTGCGGGCCAGGAGCTCCGGGAAGACGCACCCGAGGGCCCCGAGCATGGCCCACCGGCAGTGGATCACCTCGAGCTCGCGGTTCTTGG
CGAAGGTCTCGGGGTCGGCCGAGAGCCCGGCGGTGTCCCACCCGTAGTCCCCGGGGAACTCGCCGGTCAGGTAGGACGGGGGCTCGCCGGAGAAGGGGCC
TAGGTACTTGACGCGGTCGGGGCCGTACCAGGGGCTCCCGGAGGAGACGGGCTTGGTGACGGTCTTCCTCATGGCGATCCTCCCGTTCCCGAAGAGCTCG
GGGGTCGACGGAGAGAGCTTCACGGCC