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Detailed information on CNT30665158


BLAST search results

BLAST vs Swiss-Prot:
sp|P12331|CB22_ORYSJ, E-value = 4e-130

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696274Triticum dicoccoidesOryza sativa62.3261.1192.8597forward
CNT30299998Triticum dicoccoidesTriticum aestivum94.2688.9798.23903forward
CNT30554984Triticum dicoccoidesOryza glaberrima62.3253.1192.8597forward
CNT30440655Triticum dicoccoidesAegilops tauschii94.2690.397.45903forward
CNT30684955Triticum dicoccoidesTriticum urartu94.4791.2396.91905forward
CNT30369334Triticum dicoccoidesOryza glumipatula62.1163.191.43595forward
CNT30103465Triticum dicoccoidesOryza rufipogon62.6352.491.5600forward
CNT30117623Triticum dicoccoidesOryza nivara62.6362.9691.33600forward
CNT30603498Triticum dicoccoidesOryza punctata55.2257.592.06529forward

Expression of CNT30665158

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MAWTKKPNMENMARRPFLISFTLSSANASGSSARPRGLGLPR*

>peptide 2 (35 aa)
MQHLSVRTTQSHNGKKQRSTTTHMQQHPSAMKLSA*

>peptide 3 (37 aa)
MVMRPSPKGAALEAFTGVPAIAGEESAMVAAAIANFE*

>peptide 4 (29 aa)
MAQRQWITSSSRFLAKVSGSAERPAVSQP*

Sequence

>CNT30665158
TTAAGCAGAAGAACAGAGATGCCTTGATTAATCTGAGAAAATAGCCAGATATTACACAAACACCATCTTGTAGTGTACACACACCAACTCCTCATCTCGA
CTCGCGCTCACATGCAACATCTATCAGTCCGGACTACTCAATCTCACAACGGGAAGAAGCAGAGATCGACGACGACACACATGCAGCAGCATCCATCAGC
CATGAAGTTGTCGGCCTAGAGGTTGAGCTGACCGCGCTCACTTGCCGGGGACGAAGTTGGTGGCGAAGGCCCAGGCGTTGTTGTTGACGGGGTCGGCGAG
GTGGTCGGCGAGGTTCTCCAGGGGCCCCTTGCCGGTGACGATGGCCTGGACGAAGAAGCCGAACATGGAGAACATGGCGAGGCGGCCGTTCTTGATCTCC
TTCACCTTGAGCTCCGCGAACGCCTCGGGGTCCTCGGCGAGGCCCAGGGGGCTGGGGTTGCCGAGGTAGTCGAGGCCGCCCTCGCTGAAGATCTGGGAGC
CGGCCTTGAACCACACGGCCTCGCCGAACTTGACGCCGTTGCGGGCGAGCAGCTCCGGGAAGACGCAGCCGAGCGCGCCGAGCATGGCCCAGCGGCAGTG
GATCACCTCCAGCTCCCGGTTCTTGGCGAAGGTCTCGGGGTCGGCGGAGAGGCCCGCGGTGTCCCAGCCGTAGTCGCCGGGGAACTCGCCGGTGAGGTAG
CTCGGGGGGTCGCCGGAGAGCGGGCCGAGGTAGAGCACGCGGTCGGAGCCGTACCACGGGCTGCTGGACGCCGCCACCTTGGGCTTGCCCGCCGTCTTGC
GCATGGTGATGCGGCCCTCCCCGAAGGGCGCCGCCCTGGAGGCCTTCACCGGGGTGCCGGCCATCGCCGGGGAGGAGAGCGCCATGGTCGCGGCCGCCAT
TGCTAACTTCGAGTGAGCTGAGGCTGACAGTAGGAGGCGCTGGTGGTCGTTGGTGACT