Detailed information on CNT30587514


BLAST search results

BLAST vs Swiss-Prot:
sp|P27495|CB24_TOBAC, E-value = 3e-141

BLAST vs NONCODE:
NONSTUT001352, E-value = 8e-25

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695933Musa acuminataOryza sativa66.1156.1288550forward
CNT30641254Musa acuminataNymphaea colorata35.2229.0487.03293forward
CNT30629403Musa acuminataVigna unguiculata64.7874.8684.04539forward
CNT30709832Musa acuminataGlycine max34.9832.0186.25291forward
CNT30300533Musa acuminataTriticum aestivum56.7346.2389.83472forward
CNT30554984Musa acuminataOryza glaberrima66.2349.0287.3551forward
CNT30440655Musa acuminataAegilops tauschii56.7347.289.83472forward
CNT30472624Musa acuminataSaccharum spontaneum64.966.8385.93540forward
CNT3011490Musa acuminataZea mays65.3860.7185.48544forward
CNT30129909Musa acuminataCorymbia citriodora34.9840.0390.38291forward
CNT30684955Musa acuminataTriticum urartu64.4254.0387.87536forward
CNT30363113Musa acuminataSorghum bicolor57.0948.2287.16475forward
CNT30621216Musa acuminataCajanus cajan35.2238.486.69293forward
CNT30369334Musa acuminataOryza glumipatula63.5856.190.36529forward
CNT30103465Musa acuminataOryza rufipogon66.1148.0388550forward
CNT30117623Musa acuminataOryza nivara66.1157.7188550forward
CNT30603498Musa acuminataOryza punctata56.3750.9887.42469forward

Expression of CNT30587514

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAHRQWITSNSRFLAKVSGSAERPAVSHP*

>peptide 2 (37 aa)
LLQQILVHIALLLHSTRERDEKGSMHTLNAVHQTDHT*

>peptide 3 (31 aa)
MRKAPCTHSMRCTRLTTRSACSHLPGTKLVA*

>peptide 4 (43 aa)
MACTKNPNMENMASLPFLISFTFSSANASGSSARPSGSKLPPG*

>peptide 5 (47 aa)
MVTLPWPRTPEAEGASFTALPAKEGEERAIVAAMEEFLRWGLPSELEL

Sequence

>CNT30587514
TTACTCCAACAAATACTAGTACACATTGCCCTCCTCTTACACAGCACAAGAGAAAGAGATGAGAAAGGCTCCATGCACACACTCAATGCGGTGCACCAGA
CTGACCACACGTAGCGCCTGCTCTCACTTGCCGGGCACGAAGTTGGTGGCGTAGGCCCAGGCGTTGTTGTTGACGGGGTCGGCCAGGTGGTCGGCCAGGT
TCTCCAGCGGCCCCTTCCCGGTCACGATGGCCTGCACGAAGAACCCAAACATGGAGAACATGGCCAGCCTCCCGTTCTTGATCTCCTTCACCTTCAGCTC
CGCGAACGCCTCCGGGTCGTCGGCGAGGCCGAGCGGGTCGAAGCTGCCGCCCGGGTAGTCCAGCCCCCCCTCGCTAAAGATCTGCGCCCCCGCCTTGAAC
CAGACGGCTTCCCCGAACTTGACCCCGTTGCGGGCCAGCAGCTCCGGGAAGACGCACCCCAGCGCGCCCAGCATGGCCCACCGGCAGTGGATCACCTCCA
ACTCCCGGTTCTTGGCGAAGGTCTCGGGATCGGCCGAGAGGCCAGCGGTGTCCCACCCGTAGTCGCCTGGGAACTCGCCGGTCAGGTAGGATGGGGGCTC
GCCGGATAAGGGGCCCAAGTACTTGACGCGGTCGGGGCCGTACCATGGGCTGCCGGAGGAGGCAGCCGGCTTGCCGCCTGCCTTGCGCATGGTGACCCTG
CCCTGGCCGAGGACGCCGGAGGCGGAAGGGGCGAGCTTCACGGCCTTGCCGGCGAAGGAGGGGGAGGAGAGGGCCATTGTTGCAGCCATGGAGGAGTTCT
TGAGGTGGGGCCTGCCGAGTGAACTTGAGCTG