Detailed information on CNT30684955


BLAST search results

BLAST vs Swiss-Prot:
sp|P12331|CB22_ORYSJ, E-value = 3e-138

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695933Triticum urartuOryza sativa60.4861.2292600forward
CNT30300533Triticum urartuTriticum aestivum97.1894.4296.99964forward
CNT30587514Triticum urartuMusa acuminata54.0364.4287.87536forward
CNT30554984Triticum urartuOryza glaberrima60.5853.4790.85601forward
CNT30440655Triticum urartuAegilops tauschii97.1896.497.1964forward
CNT30250793Triticum urartuAvena sativa67.8465.9892.42673forward
CNT30665158Triticum urartuTriticum dicoccoides91.2394.4796.91905forward
CNT30471514Triticum urartuSaccharum spontaneum60.8971.8290.07604forward
CNT3011490Triticum urartuZea mays61.0967.6388.78606forward
CNT30129909Triticum urartuCorymbia citriodora54.237489.03538forward
CNT30363113Triticum urartuSorghum bicolor53.8354.2192.88534forward
CNT30369334Triticum urartuOryza glumipatula59.9863.192.27595forward
CNT30103465Triticum urartuOryza rufipogon60.4852.492600forward
CNT30117623Triticum urartuOryza nivara60.4862.9691.83600forward
CNT30603498Triticum urartuOryza punctata53.3357.593.01529forward

Expression of CNT30684955

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MQHLSVRTTQSQNGKKQRSTTTHMQQHPSAMKLSA*

>peptide 2 (43 aa)
MACTKKPNMENMARRPFLISFTLSSAKASGSSARPRGSKLPPG*

>peptide 3 (44 aa)
MVMRPSPKGAALEAFTGVPAIAGEESAMVAAAIARCVLAGFCFG*

>peptide 4 (29 aa)
MAQRQWMTSSSRFLAKVSGSADSPAVSQP*

Sequence

>CNT30684955
ACAAGTAGTTAAGCAGAAGAACAGAGATGCCTTGATTGATCTGAAAAATAACCAGATACATTACACAAACACCATCTTGTAGTGTACACACACCAACTCC
TCATCTCGACTCGCCCTCACATGCAACATCTATCAGTCCGGACTACTCAATCTCAGAACGGGAAGAAGCAGAGATCGACGACGACACACATGCAGCAGCA
TCCATCAGCCATGAAGTTGTCGGCCTAGAGCTTGAGCTGACTGCGCTCACTTGCCGGGGACGAAGTTGGTGGCGAAGGCCCAGGCGTTGTTGTTGACGGG
GTCGGCGAGGTGGTCGGCGAGGTTCTCCAGGGGGCCCTTGCCGGTGACGATGGCCTGCACGAAGAAGCCGAACATGGAGAACATGGCGAGGCGGCCGTTC
TTGATCTCCTTCACCTTGAGCTCCGCGAAGGCCTCGGGGTCCTCGGCGAGGCCCAGGGGGTCGAAGCTGCCGCCGGGGTAGTCGAGGCCGCCCTCGCTGA
AGATCTGGGAGCCGGCCTTGAACCAGACGGCCTCGCCGAACTTGACGCCGTTGCGGGCGAGCAGCTCGGGGAAGACGCAGCCGAGCGCGCCGAGCATGGC
CCAGCGGCAGTGGATGACCTCCAGCTCCCGGTTCTTGGCGAAGGTCTCGGGGTCGGCGGACAGCCCCGCGGTGTCCCAGCCGTAGTCACCGGGGAACTCG
CCGGTGAGGTAGCTCGGGGGGTCGCCGGAGAGCGGGCCGAGGTAGAGCACGCGGTCGGAGCCGTACCACGGGCTGCTGGACGCCGCCACCTTGGGCTTGC
CCGCCGTCTTGCGCATGGTGATGCGGCCCTCGCCGAAGGGCGCCGCCCTGGAGGCCTTCACCGGGGTGCCGGCCATCGCCGGGGAGGAGAGCGCCATGGT
CGCGGCCGCCATCGCGCGCTGCGTGCTAGCTGGCTTTTGCTTCGGGTGAGCTGAGGCTGGCAGTGGGAGGCGCTGGTGGTCGTTGGTGCTGT