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Detailed information on CNT30440289


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LM15|RA213_ARATH, E-value = 6e-08

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696108Aegilops tauschiiOryza sativa40.21387.19203forward
CNT30520678Aegilops tauschiiSetaria italica38.0232.688.54192forward
CNT30188045Aegilops tauschiiSecale cereale82.9729.3697.37419forward
CNT30554858Aegilops tauschiiOryza glaberrima58.6129.1386.49296forward
CNT30251780Aegilops tauschiiAvena sativa84.9577.7293.47429forward
CNT30450081Aegilops tauschiiSaccharum spontaneum22.384.8992.92113forward
CNT30137714Aegilops tauschiiLolium perenne93.0725.6887.02470forward
CNT30347505Aegilops tauschiiEragrostis tef23.3713.7490.68118forward
CNT30371073Aegilops tauschiiOryza glumipatula57.2329.4683.04289forward
CNT30107802Aegilops tauschiiOryza longistaminata23.3714.1391.53118forward
CNT30150787Aegilops tauschiiBrachypodium distachyon21.9830.3391.89111forward
CNT30103489Aegilops tauschiiOryza rufipogon57.2329.5283.74289forward
CNT30580794Aegilops tauschiiEchinochloa crusgalli22.386.7392.92113forward
CNT30496207Aegilops tauschiiDigitaria exilis22.385.0892.92113forward
CNT30117581Aegilops tauschiiOryza nivara37.8212.0486.91191forward
CNT30604553Aegilops tauschiiOryza punctata23.377.8890.68118forward

Expression of CNT30440289

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MERAAVGGLVVGEGRLLGGVEGAEPEAGAVAGEADL

Sequence

>CNT30440289
ATTAACCTAGCATCATGACACGCTAAAGACGGTAGTAGTAGTAGCTGACGAACACAAACTGGGTGCTAATTGGTGGCGAGAAGCGAGTCCCAGTCGATCT
CGTACGACGGGTACTTGGTGAGGGCGAAGCAGGCTGCCTCGTCCCATGGCGCCTCGCTGAAGTCGAGCTGCTGCATCTCTGGAACCTCTGCTGCGGTGGT
GGTGGCGGGTGACGGTGACGACTCCGCGGACTCCAGCGAGGACGACGCCTCGTCGGAGGACGGCGAGGAGCAGTTGCTGGTGGGGGTGGACGACGTGGCT
GCGGCGGTGGACGCGGAGACGGAGGCGGACTTCTTGCCGTTCTTGGAGGCGGTGATGTTCTGGCAGAGGGTCTGGAGCTTGGCGTCAACGGAGGCATGGA
GCGGGCCGCGGTAGGCGGCCTGGTCGTAGGCGAGGGCCGCCTCCTCGGCGGTGTCGAAGGTGCCGAGCCAGAGGCGGGTGCGGTTGCGGGGGAGGCGGAT
CTCCG