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Detailed information on CNT30137714


BLAST search results

BLAST vs Swiss-Prot:
sp|P85955|DRE1_PSEMZ, E-value = 2e-07

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520507Lolium perenneSetaria italica17.0527.4487.18312forward
CNT30188045Lolium perenneSecale cereale18.9124.2587.28346forward
CNT30224038Lolium perenneHordeum vulgare8.4733.8482.58155forward
CNT30563605Lolium perenneActinidia chinensis6.3424.5285.34116forward
CNT30554858Lolium perenneOryza glaberrima19.7835.6384.81362forward
CNT30440289Lolium perenneAegilops tauschii25.6893.0787.02470forward
CNT30251780Lolium perenneAvena sativa31.69105.0788.28580forward
CNT30150787Lolium perenneBrachypodium distachyon5.9629.7893.58109forward
CNT30103362Lolium perenneOryza rufipogon22.1336.1383.21405forward

Expression of CNT30137714

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MFWQSVWSLASTEAWSALHRRGGGRRPGRRRGRPPRRCRRCRARGGCGCGGDGSPPPTCPSGAA*

>peptide 2 (72 aa)
MFLGKTREKSAWIPNQNVEQAEEKKVDQQEPQQKEVALVIDLDTSCKEAWKKNLAWQATNKLLGQKRKKEQI*

Sequence

>CNT30137714
GGGGAATAATAGGGATCATCATGCGATTCACATCAATTGACGAATTTCACAAGACAGAAACTGATACAACACTAACAACAAAATAATATAATCCACATTA
CAAGGTTTTTTGACGAGCTAATTTTACAAGACATTCACCCACTGTTACAATACGCAGAGCAGTGGCCTAGACATAGCAACGGACTTCACCGGCCGGAGTC
ACTGACCAGTGACCGACCACCGGAAGCGCCGGGCACAAAAACGCCGGCTTGACACCCCTCCGGGACTTGAACACTAACCAAACCCTAGTACAACGAGAGA
ACGAATCGGAGAGAGATCTACTACACAAGGAACAAAAGAAGGATTAGAGGCTTAGAGCTAATCCACTAATTAAAAGCCAGCGCAGAGTGTCTAAAATGCC
ATCTGCGTCGCGGCGACCATTAACAATCTGCTAAGAACTAGTAGTAGAAGTAGTAGCTGAAGACCGCTGGGTGTTAATTGGAGGCGAGCAGCGAGTCCCA
GTCGATCTCGTAGGAGGGGTACTTGGTGAGGGCGAATCCGGCGGCCTCGTCCCAGGGCGCCTCGCTGAAGTCGAGCTGCTGCATCTCCAGAACCTCTGCT
GGGGCGGCGGTGGTGGGCGACGGCGACGACTCGGGCGACTCCAGGGAGGAGGACGCGTCGTCAGAGGAGGGCGAGGAGCAGTTGCTGGTGGGGGTGGACG
ATGTTGCGGCGGCGGTGGACGCGGAGACGGAGAGGCAGGCGGTGGACTTCTTGGCGTTCTTGGCGGCGGTGATGTTCTGGCAGAGCGTCTGGAGCTTGGC
GTCGACGGAGGCGTGGAGCGCGCTGCATCGCCGCGGAGGCGGTAGGCGGCCTGGTCGTAGGCGAGGGCGGCCTCCTCGGCGGTGTCGAAGGTGCCGAGCC
AGAGGCGGGTGCGGTTGCGGGGGAGACGGATCTCCGCCACCCACTTGCCCCAGTGGCGCTGCCTGACGCCGCGGTAGAGCTTCTGCGGGCGCGGCGGGGT
GGCCACCGCCGTTGCTGCGGAAGCGGGCTTCATGGGCTGGGCCCGCGGGCCGAGGTGGCCCGGCGGGTTGTTCTGGCGCTGGAGGTGGAGGCGTGCCTGG
ATGTAGTGCATCTGGGCCGGGCTGAGCTCGGCCTGGGCCTGGGCCTGCACCCCGTACTGGTACCCGCTGTAGGCGGCGGCGGCGGAGGCGGCGTGGGGCT
GAGGTGGGAGTGGAGCGGAGGGGAGGCGGAGGCGTCTCGGATAAAAGGCTCGAGCGCTCTCAGGAGCTCCTCCCCGGACAGATCTATGGCTGCTGCCATC
TTACTCTAGCTTCTTCAAAGACAAACTTTTTTTTGGATTTTTTTGATGTTTCTTGGAAAAACAAGAGAGAAATCTGCCTGGATTCCAAACCAAAACGTAG
AACAGGCAGAGGAAAAAAAGGTAGATCAGCAAGAGCCACAGCAAAAAGAGGTGGCTTTGGTGATAGATCTGGACACGAGCTGCAAGGAGGCGTGGAAAAA
GAACCTCGCTTGGCAAGCAACTAACAAGCTACTAGGACAGAAGAGAAAAAAAGAACAGATCTGAAGCCCGGGATCTAAAAGGCCCTGGAACTTGACTGCT
CTGTGACCGACGAGAAGGAAGACGAAGAGGAGGGGAGGAAGAGGGATTGAGATTCAGAGAAGCTTACCTTGGAGACGCAAGAACTCGCTCGGATCTATCT
TACCTCGCTCAATCTCACGGGAAGGCTTGTGTGTTCGCTGGGTTTGTTCGTGGGCTTTTTGGTGGGTGGTTGGTTGGCTGTGGAGTGTGGTCGAAGGTCG
GAGTCGGAGTGGGCGAAATGGGAGGCGGGG