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Detailed information on CNT3085509


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30422640Vigna radiataPapaver somniferum25.9726.1685.98107forward
CNT3037927Vigna radiataCucumis melo31.3126.9983.72129forward

Expression of CNT3085509

Peptides detected in this lncRNA

>peptide 1 (68 aa)
MIHSVELETGQDVSLNKVTQDCQHSQPSILDFLQLQILQRLLILAKTKRVKQRSSGVCWITRTSKTFF*

>peptide 2 (36 aa)
MSFLRVAHQEQNVQMMMMMIQYQRAKRGYRKVIEFW*

Sequence

>CNT3085509
AAGCTGTGAAATGTTTCTAATTGTTTTACATGTCATTTCTTAGAGTGGCACACCAGGAACAAAATGTCCAGATGATGATGATGATGATACAGTACCAAAG
AGCAAAGAGAGGATATAGAAAAGTGATTGAGTTTTGGTAACTGCGTACAACAACAACCCAGAGAGTAAAGAATATGTAACAACATATGATACATTCAGTG
GAACTTGAGACTGGTCAAGATGTTAGCTTGAACAAAGTAACCCAAGATTGCCAACATAGCCAACCTTCCATTCTTGACTTCCTTCAGCTTCAAATCCTTC
AGCGACTTCTCATCCTTGCCAAAACCAAGAGGGTTAAACAAAGGTCCTCCGGGGTATGCTGGATCACCAGAACCTCCAAGACCTTTTTCTAGTCCTAAGA
AGTATTGTTTCC