Detailed information on CNT30315824


BLAST search results

BLAST vs Swiss-Prot:
sp|P09756|CB23_SOYBN, E-value = 2e-177

BLAST vs NONCODE:
NONBNAT007398, E-value = 1e-101

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30514316Corylus avellanaJuglans regia42.7656.5784.96452forward
CNT30500907Corylus avellanaCoffea canephora63.2971.4785.95669forward
CNT30269327Corylus avellanaChenopodium quinoa49.8660.2381.97527forward
CNT30380511Corylus avellanaManihot esculenta32.3648.5887.13342forward
CNT30629263Corylus avellanaVigna unguiculata58.8560.4586.66622forward
CNT30504491Corylus avellanaNicotiana attenuata62.6369.8384.29662forward
CNT30709739Corylus avellanaGlycine max52.8958.7887.3559forward
CNT3046618Corylus avellanaPrunus dulcis61.9778.3583.97655forward
CNT30562273Corylus avellanaActinidia chinensis59.763.6785.74631forward
CNT3088186Corylus avellanaVigna radiata64.3362.3986.91680forward
CNT30538977Corylus avellanaBrassica napus55.9171.4681.39591forward
CNT30609649Corylus avellanaGossypium raimondii55.2577.1585.62584forward
CNT30623366Corylus avellanaDaucus carota62.6363.5985.95662forward
CNT30359492Corylus avellanaLactuca sativa59.0472.9884.62624forward
CNT30153357Corylus avellanaPrunus persica63.137.7784.11667forward
CNT30705057Corylus avellanaPrunus avium53.5568.4484.63566forward
CNT30119285Corylus avellanaCitrus clementina62.5473.9486.23661forward
CNT30176340Corylus avellanaVigna angularis34.5339.3386.58365forward

Expression of CNT30315824

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAHLEWMTSSSRFLAKVSGSAESPAVSQP*

>peptide 2 (60 aa)
DDKVMIFENPKIITFNDQRSSTAGNAHSVHKSIPQYTSPNNNMINLKFTLNFEEKSFMVS*

>peptide 3 (31 aa)
MGQSFHPGRWGPSPHRVAHRQYGNPQRHPSR*

>peptide 4 (40 aa)
METRPTPSSGVDGATCTALPANDGEERAIVEAAIVELRLE*

Sequence

>CNT30315824
ATGATGATAAAGTAATGATCTTTGAAAACCCAAAAATAATAACATTCAATGATCAGAGGAGCAGTACTGCAGGTAATGCACATTCTGTGCACAAATCCAT
ACCCCAATATACATCACCCAATAATAATATGATCAATCTTAAATTCACACTCAATTTTGAGGAGAAAAGCTTCATGGTGTCTTAACATCTCCGACTCACT
TTCCGGGGACGAAGTTTGTTGCGTAAGCCCAGGCATTGTTGTTTACTGGGTCGGCAAGGTGGTCGGCCAAGTTCTCCAATGGCCCCTTTCCAGTCACAAT
GGCCTGAACAAAGAAGCCAAACATAGAGAACATAGCCAATCTTCCATTCTTGAGCTCCTTCACCTTAAGCTCAGCAAAAGCTTCCGGGTCATCAGCAAGA
CCCAATGGGTCAAAGCTTCCACCCGGGTAGATGGGGTCCGTCACCTCACCGAGTGGCCCACCGGCAATACGGTAACCCTCAACGGCACCCATCAAGATGA
CCTGAGTTGCCCAGATGGCTAGAATGCTTTGCGCGTGGACCAAGCTCGGGTTGCCCAAGTAGTCAAGACCGCCTTCGCTGAAGATCTGAGCTCCGGCCTT
GAACCACACGGCCTCGCCGAACTTGACGCCGTTCCGGGACAAGAGCTCCGGGAAGACGCACCCGAGGGCTCCAAGCATGGCCCATCTGGAGTGGATGACT
TCAAGCTCACGGTTCTTGGCAAAGGTCTCTGGGTCAGCGGAAAGCCCAGCAGTGTCCCAGCCATAGTCACCGGGGAATTCTCCGGTAAGGTAGGATGGGG
GCTCACCGGAGAATGGGCCCAAGTACTTGACACGGTCAGGGCCGTACCATGGGCTGCCGGAGGAAGCCTGCTTGAAGGCTGTTTTCCTCATGGAGACACG
TCCAACACCAAGCTCCGGGGTTGACGGAGCAACCTGCACCGCCTTGCCGGCAAATGATGGGGAAGAGAGAGCCATTGTTGAAGCAGCCATTGTAGAATTG
AGGTTAGAATAGAGAAAGAGACAGCAATGCAAGGGAAGGAGTGATCGATGGGTGTTT