Detailed information on CNT30623366


BLAST search results

BLAST vs Swiss-Prot:
sp|P92919|CB23_APIGR, E-value = 0.0

BLAST vs NONCODE:
NONBNAT007398, E-value = 4e-89

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30534416Daucus carotaEucalyptus grandis63.558.782.75661forward
CNT30315824Daucus carotaCorylus avellana63.5962.6385.95662forward
CNT30514020Daucus carotaJuglans regia32.3738.0885.46337forward
CNT30500907Daucus carotaCoffea canephora63.5970.7383.99662forward
CNT30616124Daucus carotaSesamum indicum62.5457.0684.64651forward
CNT30525395Daucus carotaPhaseolus vulgaris63.464.7783.79660forward
CNT30504491Daucus carotaNicotiana attenuata63.569.7386.08661forward
CNT30633568Daucus carotaCapsicum annuum61.9669.3586.2645forward
CNT3099363Daucus carotaSolanum tuberosum63.563.2586.54661forward
CNT30562273Daucus carotaActinidia chinensis60.6163.6784.63631forward
CNT3088186Daucus carotaVigna radiata63.560.6482.45661forward
CNT30508942Daucus carotaSolanum lycopersicum62.7362.1386.68653forward
CNT30146197Daucus carotaMedicago truncatula63.562.382.45661forward
CNT30598305Daucus carotaFraxinus excelsior41.6963.5485.94434forward
CNT30609649Daucus carotaGossypium raimondii57.2578.7383.89596forward
CNT30714756Daucus carotaMalus domestica golden51.685385.13538forward
CNT30359492Daucus carotaLactuca sativa55.2467.2585.91575forward
CNT30417081Daucus carotaPapaver somniferum59.5662.2581.61620forward
CNT30119285Daucus carotaCitrus clementina63.573.9482661forward
CNT30337332Daucus carotaCynara cardunculus63.2149.8185.11658forward
CNT30725309Daucus carotaLupinus angustifolius63.479.0484.24660forward

Expression of CNT30623366

Peptides detected in this lncRNA

>peptide 1 (43 aa)
TIICINNCMGKKDMKTQYSDRHMYNTKFHNHIRDQTNLHHNTN*

>peptide 2 (38 aa)
MLQGLQQGLMGRNFLRGKGGQQPHLVALLQHGIPQQHP*

>peptide 3 (82 aa)
MFSRSHFPGTKFVAKAHALLFTGSAKWSARFSNGPFPVTMAWTKNPNMENMASLPFLSSFTLSSANASGSSARPNGSKLPPG*

>peptide 4 (37 aa)
METLPLPKSSDEDGATCTALPAKEGEERAIVEAAIWE*

>peptide 5 (31 aa)
MRMELLAQPCLQKKEKKEPLLRQPFGSNRKI*

Sequence

>CNT30623366
ACCATAATTTGTATCAATAATTGTATGGGAAAGAAGGATATGAAAACTCAATACTCTGACAGACACATGTATAACACAAAATTTCATAATCACATCAGAG
ATCAAACCAATTTACATCACAATACAAATTAGAAGAATTGAATGTTTTCGCGCTCTCACTTTCCAGGGACGAAGTTTGTTGCAAAGGCCCATGCATTGTT
GTTTACAGGGTCTGCCAAGTGGTCAGCCAGGTTCTCCAATGGACCCTTTCCTGTGACAATGGCCTGGACAAAGAATCCGAACATGGAGAACATGGCTAGT
CTTCCATTCTTGAGCTCCTTCACCTTAAGTTCAGCAAATGCTTCAGGGTCTTCAGCAAGGCCTAATGGGTCGAAACTTCCTCCGGGGTAAAGGGGGTCAA
CAACCTCACCTAGTGGCCCTCCTGCAACACGGTATCCCTCAACAGCACCCATGAGAATTACCTGGGTAGCCCAGATGGCCAAGATGCTTTGTGCATGGAC
CAAGCTTGGGTTGCCCAAGTAGTCAAGTCCACCCTCACTGAAGATCTGTGAGCCAGCCTTGAACCACACAGCTTCGCCAAACTTGACACCATTTCGGGCC
AAGAGCTCGGGGAACACACAGCCAAGAGCTCCAAGCATAGCCCATCTGGAGTGGATGACTTCAAGCTCACGGTTCTTGGCAAAGGTCTCGGGATCCGCGG
AGAGTCCAGCAGTGTCCCAGCCATAGTCACCAGGGAATTCACCAGTCAGGTAAGATGGAGCCTCACCAGAGAATGGGCCCAAGTACTTGACTCTGTCTGG
GCCGTACCATGGGCTGTCTGAGACAGTGACTTTCTTGACAGTCTTCCTCATGGAAACTCTTCCATTGCCAAAGAGCTCAGATGAGGATGGAGCTACTTGC
ACAGCCTTGCCTGCAAAAGAAGGAGAAGAAAGAGCCATTGTTGAGGCAGCCATTTGGGAGTAACAGAAAGATATGATGATAGTTGTTGTAAGTGTTAGTA
ATGTAAGAAGATGAAACTTAAGGCAGTTATTTATATTAGCT