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Detailed information on CNT30153357


BLAST search results

BLAST vs Swiss-Prot:
sp|P27495|CB24_TOBAC, E-value = 3e-179

BLAST vs NONCODE:
NONMTRT001605, E-value = 3e-44

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30534609Prunus persicaEucalyptus grandis33.8654.8183.11598forward
CNT30315824Prunus persicaCorylus avellana37.7763.184.11667forward
CNT30702989Prunus persicaQuercus lobata37.5469.4280.39663forward
CNT30500907Prunus persicaCoffea canephora37.8871.4782.21669forward
CNT30616124Prunus persicaSesamum indicum37.1557.4982.16656forward
CNT30269327Prunus persicaChenopodium quinoa23.6747.7784.21418forward
CNT30380511Prunus persicaManihot esculenta19.5449.0183.48345forward
CNT30404250Prunus persicaBeta vulgaris23.3340.1681.55412forward
CNT30525395Prunus persicaPhaseolus vulgaris37.3764.7783.79660forward
CNT30628736Prunus persicaVigna unguiculata32.3977.384.79572forward
CNT30504491Prunus persicaNicotiana attenuata37.4969.8382.93662forward
CNT30709101Prunus persicaGlycine max28.6559.4684.39506forward
CNT3046618Prunus persicaPrunus dulcis47.3410097.37836forward
CNT30633494Prunus persicaCapsicum annuum37.2671.9982.83658forward
CNT3091778Prunus persicaSolanum tuberosum37.2671.7682.37658forward
CNT30562269Prunus persicaActinidia chinensis35.8466.5682.31633forward
CNT3088186Prunus persicaVigna radiata38.1161.7481.58673forward
CNT30543163Prunus persicaBrassica napus18.1266.1282.81320forward
CNT30508817Prunus persicaSolanum lycopersicum36.8165.5282.62650forward
CNT30146374Prunus persicaMedicago truncatula37.0969.6881.53655forward
CNT30310534Prunus persicaCamelina sativa35.7953.3880.22632forward
CNT30609649Prunus persicaGossypium raimondii32.2275.1782.43569forward
CNT30217700Prunus persicaKalanchoe fedtschenkoi23.3952.3484.26413forward
CNT30714756Prunus persicaMalus domestica golden30.465382.34538forward
CNT30623258Prunus persicaDaucus carota37.4967.1484.44662forward
CNT30621493Prunus persicaCajanus cajan38.5650.7583.41681forward
CNT30359492Prunus persicaLactuca sativa35.3372.9883.81624forward
CNT30429024Prunus persicaPapaver somniferum33.4748.0182.06591forward
CNT30572261Prunus persicaVitis vinifera12.9127.8786.4228forward
CNT30705057Prunus persicaPrunus avium46.8310095.04827forward
CNT30119285Prunus persicaCitrus clementina38.1775.3981.9674forward
CNT30337332Prunus persicaCynara cardunculus37.2649.8184.65658forward
CNT30725332Prunus persicaLupinus angustifolius37.4364.1784.11661forward

Expression of CNT30153357

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MVTRPSPTMLETEEPSLTAWPAREGEERAIVEEAI*

>peptide 2 (29 aa)
MAHLEWITSSSRFLAKVSGSAESPAVSQP*

>peptide 3 (44 aa)
MSVGLIFEVSSLFPCFASKFQSLLLFFPRQDEFYQHFLDENKCQ*

>peptide 4 (43 aa)
MQIIGHPKFCRLLQNLVCCFICCLLPVTFSYIDAHESYACQLG*

>peptide 5 (58 aa)
MACTKKPNMENMASLPFFSSFTFSSAKASGSSARPNGSKLPPGYNGSVISPRGPPATL*

Sequence

>CNT30153357
CTCACATTTTATGCACAATGTAGCATTTGCCTATACGGATTCGGAAAATCGAAATCAAGTTACATCTTAGAATGAATGTGATGGTTGTATTGTATGAGAT
ATGACACTCTTAATTAAATGGAAGTTCTATAATCTTCATTATTAGAAACTACAGAAATAAAACAATGCAGATAATTGGACATCCGAAGTTCTGCAGACTG
CTGCAGAATTTGGTCTGTTGCTTCATCTGCTGCCTTCTCCCTGTTACTTTCTCTTATATAGATGCTCATGAGTCATATGCATGTCAGTTGGGTTGATTTT
TGAAGTGTCCTCTCTCTTCCCTTGCTTTGCCTCTAAATTCCAGTCCTTACTTTTGTTTTTTCCACGACAAGATGAGTTTTATCAGCATTTTCTGGATGAA
AACAAATGCCAATGAGGCTTTTCCCATTTCTTGCAGTGCATCATAATTCTGATTCACTTCAGTAATGTAAGCAAATTGAGCTTTATAAGTAAGGTGAATC
TATTCACATGCAAATTTTTACTCCAAGAAATTGTTGATGCATTCTTTTGCACTGCCGACACCCAAGTAAGTTTCATAAAAATAACACATTAACAGAAATT
CTGTTTCACAACAATTGTTACAAATCTGCTTCTTTCTCTCAAGTTCTCAGCCTCACTTTCCAGGAACAAAGTTTGTGGCATATGACCAAGCATTGTTGTT
AACAGGATCAGCTAAGTGGTCAGCCAAGTTCTCAATTGGCCCCTTTCCTGTAACAATGGCCTGCACAAAGAAACCAAACATGGAAAACATGGCGAGTCTT
CCATTCTTCAGCTCCTTCACCTTCAGCTCAGCGAAAGCCTCTGGATCCTCTGCAAGGCCTAATGGGTCAAAGCTCCCACCTGGATATAATGGGTCAGTGA
TCTCTCCGAGAGGCCCACCTGCAACTCTGTAACCTTCCACTGCACCCATCAAGATAACTTGTGTGGCCCAAATTGCTAAAATGCTTTGGGCATGGACTAA
GCTTGGGTTTCCCAAGTAGTCTAGCCCACCCTCACTGAATATCTGGGCGCCAGCCTTGAACCATACAGCCTCACCGAACTTGACCCCGTTACGGGACAAG
AGTTCAGGGAAAACGCAGCCCAGAGCACCAAGCATGGCCCATCTTGAATGGATAACTTCAAGCTCACGGTTCTTGGCAAAGGTCTCTGGGTCAGCTGAGA
GCCCAGCAGTGTCCCAACCGTAATCACCAGGGAATTCTCCAGTGAGGTAAGAAGGGGCCTCGCCAGAGAACGGGCCCAAGTATTTGACACGGTCAGGGCC
GTACCACGGGCTGCCGGATGAAACATTTTTGGACCTGGATGCGGTTTTGCGCATGGTAACTCGGCCCTCACCAACAATGTTAGAAACAGAGGAACCGAGC
TTGACAGCTTGGCCAGCAAGAGAAGGGGAGGAGAGAGCCATTGTTGAAGAAGCCATTTGAGGAAAAATGAAAGTGTATTATTTGTGAAAATCTTCAGTCT
CTCAGACAATGTGAGAGGGCCGAGTGCTTGTTTTCTTTGGGAAGAAGAGACGTTGGTGGGTATTTGTATAGGTTTGGTTCAAAGGGTCCTTATCTTTCTG
ATATCTTCATCTCTTTTCTCATTGGAGAAGACCAAGTTTGAAAATCTCTACCCTTCCAGTTGGCTTGATATGCTCCACTAGTTTATTACTTCCCAAAACA
GAAAGAAAAATTAATATCAAATTTGGAAATTATATGCTTTGATTTCTAGCCACTACTAGAATTTTG