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Detailed information on CNT30629263


BLAST search results

BLAST vs Swiss-Prot:
sp|P09756|CB23_SOYBN, E-value = 2e-164

BLAST vs NONCODE:
NONBNAT005173, E-value = 4e-64

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641326Vigna unguiculataNymphaea colorata61.2256.484.76630forward
CNT30534609Vigna unguiculataEucalyptus grandis60.4557.0186.17622forward
CNT30315824Vigna unguiculataCorylus avellana60.4558.8586.66622forward
CNT30500907Vigna unguiculataCoffea canephora57.4363.1485.11591forward
CNT30616124Vigna unguiculataSesamum indicum57.0551.4585.01587forward
CNT30728214Vigna unguiculataCorchorus capsularis41.550.7185.48427forward
CNT30524978Vigna unguiculataPhaseolus vulgaris57.8276.3896.97595forward
CNT30709101Vigna unguiculataGlycine max61.7174.6290.39635forward
CNT30562281Vigna unguiculataActinidia chinensis57.2476.9983.02589forward
CNT3088186Vigna unguiculataVigna radiata72.568.4497.05746forward
CNT30313761Vigna unguiculataCamelina sativa54.9167.5882.12565forward
CNT30714756Vigna unguiculataMalus domestica golden45.0945.7185.99464forward
CNT30621216Vigna unguiculataCajanus cajan45.7761.7390.23471forward
CNT3055180Vigna unguiculataAmborella trichopoda57.3457.1283.39590forward
CNT30119285Vigna unguiculataCitrus clementina56.8565.4484.62585forward
CNT30725349Vigna unguiculataLupinus angustifolius60.6460.5885.1624forward

Expression of CNT30629263

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MLTFRGRSWWRRFSKGPFPVTMAWTKKPNMENMANLPFLSSLTLSSAKASGSSARPNGSKLPPG*

>peptide 2 (46 aa)
TFLLLESTNRSSNWWRQEQKKKNRKREKKMGICKKQVTLSWIGYTR*

>peptide 3 (50 aa)
MLTLPTSGADGASFTALPAKEGDESAMEDAAAIVAKNFAFSFYSLLSGVGV

>peptide 4 (36 aa)
RFFYWNQRIEVQIGGAKSRRKKTVKERRRWEFVKSK*

>peptide 5 (41 aa)
MGQASRPCQPRRGMRVPWRMQQPLLQKTLLFLFTLCFLVWEW

>peptide 6 (29 aa)
MAHLEWMTSSSRFLAKVSGSAESPAVSQP*

Sequence

>CNT30629263
CACGTTTCTTTTACTGGAATCAACGAATCGAAGTTCAAATTGGTGGCGCCAAGAGCAGAAGAAAAAAAACCGTAAAAGAGAGAAGAAGATGGGAATTTGT
AAAAAGCAAGTAACATTAAGTTGGATCGGATACACAAGATGATTATCTGAAGTACATTGCAATAACATATACTTCAACAAACAGAAATCTAAAACTCTCG
AGTACACAGGTCATTCTGTTGATGCTCACTTTCCGGGGACGAAGTTGGTGGCGTAGGTTCTCCAAGGGTCCCTTTCCGGTGACAATGGCCTGGACGAAGA
AGCCGAACATGGAGAACATGGCCAACCTACCGTTCTTGAGTTCCTTGACCTTGAGCTCAGCGAAGGCCTCTGGGTCGTCAGCGAGACCCAATGGGTCGAA
GCTGCCACCGGGGTAAATGGGGTCAGTGACCTCACCGAGAGGCCCACCGGCAATACGGTAACCCTCGACGGCGCCCATGAGGATGACTTGGGTGGCCCAG
ATGGCAAGGATGCTCTGAGCGTGGATGAGGCTTGGGTTGCCCAAGTAGTCGAGCCCACCCTCGCTGAAGATCTGGGAACCAGCTTTGAACCAGACGGCCT
CGCCGAATTTCACGCCGTTGCGGGACAAGAGTTCGGGGAAGACGCAGCCCAAGGCTCCGAGCATGGCCCACCTGGAGTGGATGACTTCCAGCTCACGGTT
CTTGGCGAAGGTCTCTGGGTCAGCGGAAAGCCCAGCAGTGTCCCAACCGTAGTCGCCTGGGAACTCACCGGTGAGGTAGGACGGGGGTTCGCCGGAGAAT
GGGCCCAAGTACTTGACACGGTCTGGGCCGTACCATGGGCTTCCGGAGGAGACCTGCTTGGTGGCGGTCTTCCTCATGCTGACCCTCCCGACTTCGGGGG
CTGATGGGGCAAGCTTCACGGCCTTGCCAGCCAAGGAGGGGGATGAGAGTGCCATGGAGGATGCAGCAGCCATTGTTGCAAAAAACTTTGCTTTTTCTTT
TTACTCTCTGCTTTCTGGTGTGGGAGTGG