Detailed information on CNT30514316


BLAST search results

BLAST vs Swiss-Prot:
sp|P12333|CB2A_SPIOL, E-value = 6e-133

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315824Juglans regiaCorylus avellana56.5742.7684.96452forward
CNT30500907Juglans regiaCoffea canephora57.0748.7282.46456forward
CNT30525395Juglans regiaPhaseolus vulgaris57.3244.9582.97458forward
CNT30628736Juglans regiaVigna unguiculata57.261.7684.46457forward
CNT30709101Juglans regiaGlycine max56.9553.4784.84455forward
CNT30564070Juglans regiaActinidia chinensis52.8249.3682.7422forward
CNT30146197Juglans regiaMedicago truncatula57.3243.1781.22458forward
CNT30623258Juglans regiaDaucus carota53.6943.5183.68429forward
CNT30621493Juglans regiaCajanus cajan56.9533.983.3455forward
CNT30153531Juglans regiaPrunus persica58.270.5683.23465forward
CNT30705057Juglans regiaPrunus avium75.0972.5582.17600forward
CNT30725255Juglans regiaLupinus angustifolius57.3245.881.66458forward

Expression of CNT30514316

Peptides detected in this lncRNA

>peptide 1 (65 aa)
MPKHCCLMGQSFLLGRLGLSPHQVAHLQYDSPQLHPLRSPVWPRWLECFVRGQGLDSPSSPTHLH*

>peptide 2 (42 aa)
MVTLPSPRSSDEEGVSLTAWPAREGEERDIVEAAIGMKRKMYS

>peptide 3 (30 aa)
MGFQMRQAWVCPQFFSWLLCPHQGVQMRRE*

>peptide 4 (29 aa)
MAHREWITSSSRFLENVSGSADSPAVSQP*

Sequence

>CNT30514316
TGTGCTCTTTTAAAACAAGTTTTACAAGTACATTGTCCAGTGTCCACTGGTTTACATCAGCAGTAGCATCGAGCTAATTTCACACCACTTGCACATACAA
CTTTCACTCCAAATCCAAGAGCTTTCCTCACTTTCCAGGGACAAAGTTTGTGGCATATGCCCAAGCATTGTTGCCTAATGGGTCAAAGCTTCCTCCTGGG
TAGATTGGGTCTGTCACCTCACCAAGTGGCCCACCTGCAATACGATAGCCCTCAACTGCACCCATTAAGATCACCTGTGTGGCCCAGATGGCTAGAATGC
TTTGTGCGTGGACAAGGTTTGGATTCCCCAAGTAGTCCAACCCACCTTCACTAAAGATTTGGGCTCCGGCCTTGAACCAGACAGCTTCACCGAACTTGAC
CCCATTGCGGGCCAAGAGTTCGGGGAAAACACAACCAAGAGCTCCAAGCATGGCCCATCGCGAATGGATCACTTCGAGCTCACGGTTCTTAGAGAACGTC
TCAGGATCGGCCGATAGCCCAGCAGTGTCCCAACCATAATCACCTGGGAATTCTCCTGTGAGGTAGGATGGGGGCTCACCAGAGAATGGGCCCAAGTACT
TAACACGATCGGGTCCATACCATGGGCTTCCAGATGAGACAGGCTTGGGTCTGCCCCCAGTTTTTCTCATGGTTACTCTGCCCTCACCAAGGAGTTCAGA
TGAGGAGGGAGTAAGCCTGACAGCTTGGCCAGCTAGAGAAGGAGAGGAGAGGGACATTGTTGAAGCAGCCATTGGTATGAAAAGGAAGATGTACAGCTT