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Detailed information on CNT30504491


BLAST search results

BLAST vs Swiss-Prot:
sp|P27493|CB22_TOBAC, E-value = 0.0

BLAST vs NONCODE:
NONSTUT001352, E-value = 1e-147

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30534609Nicotiana attenuataEucalyptus grandis69.6260.4983.33660forward
CNT30315824Nicotiana attenuataCorylus avellana69.8362.6384.29662forward
CNT30514020Nicotiana attenuataJuglans regia32.4934.887.99308forward
CNT30500907Nicotiana attenuataCoffea canephora69.5170.4187.41659forward
CNT30616124Nicotiana attenuataSesamum indicum69.8358.0288.37662forward
CNT30269327Nicotiana attenuataChenopodium quinoa54.0158.5186.13512forward
CNT30380511Nicotiana attenuataManihot esculenta36.8149.5788.83349forward
CNT30404043Nicotiana attenuataBeta vulgaris54.5446.8783.17517forward
CNT30525395Nicotiana attenuataPhaseolus vulgaris69.6264.7783.18660forward
CNT30628736Nicotiana attenuataVigna unguiculata60.3477.384.97572forward
CNT30709059Nicotiana attenuataGlycine max45.4679.8184.69431forward
CNT3046618Nicotiana attenuataPrunus dulcis70.4679.982.49668forward
CNT30633494Nicotiana attenuataCapsicum annuum94.4197.9291.73895forward
CNT3091768Nicotiana attenuataSolanum tuberosum90.5182.9891.84858forward
CNT30562273Nicotiana attenuataActinidia chinensis66.4663.5787.46630forward
CNT3088186Nicotiana attenuataVigna radiata69.7360.6482.45661forward
CNT30508800Nicotiana attenuataSolanum lycopersicum89.8791.3291.31852forward
CNT30173250Nicotiana attenuataTrifolium pratense59.4948.9283.69564forward
CNT30146180Nicotiana attenuataMedicago truncatula68.9968.1285.93654forward
CNT30313626Nicotiana attenuataCamelina sativa70.2557.7680.93666forward
CNT30598305Nicotiana attenuataFraxinus excelsior45.4663.187.47431forward
CNT30609649Nicotiana attenuataGossypium raimondii61.677.1586.13584forward
CNT30202642Nicotiana attenuataHelianthus annuus35.1359.7886.19333forward
CNT30714756Nicotiana attenuataMalus domestica golden56.6552.9184.17537forward
CNT30623366Nicotiana attenuataDaucus carota69.7363.586.08661forward
CNT30621493Nicotiana attenuataCajanus cajan69.6249.1884.39660forward
CNT30357114Nicotiana attenuataLactuca sativa54.6456.6787.84518forward
CNT30153357Nicotiana attenuataPrunus persica69.8337.4982.93662forward
CNT30429024Nicotiana attenuataPapaver somniferum69.4153.4582.22658forward
CNT30705057Nicotiana attenuataPrunus avium59.3968.0883.84563forward
CNT3055180Nicotiana attenuataAmborella trichopoda54.8550.3482.5520forward
CNT30336168Nicotiana attenuataCynara cardunculus69.6265.0986.82660forward
CNT30725273Nicotiana attenuataLupinus angustifolius69.263.6985.82656forward

Expression of CNT30504491

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MPLDPQQGPMGQSYHQGKVGRQPHQEAHQQHGNPQRLPSR*

>peptide 2 (46 aa)
MDTLPFPVISEADGESFTACPAKEGEERAIVEAAMVYQEESERLLV*

>peptide 3 (47 aa)
LNTNKISLYCQVAHNSFTRPSNNQNFENVLRFTFRAQSLWRMPKRCC*

>peptide 4 (68 aa)
MDQAWVAQVVKSTLAKDLGSSLEPHSLAKLDTITSQELGEDTSKSTKHSPSAVDHLKFTVLGKGFWVC*

>peptide 5 (32 aa)
MASLPFLISFTLSSANASGSSARPNGSKLPPG*

Sequence

>CNT30504491
TTTAAACACAAACAAAATCTCATTATATTGTCAAGTAGCTCACAACAGCTTTACAAGGCCATCAAACAATCAGAATTTTGAGAATGTTTTAAGATTCACT
TTCCGGGCACAAAGTTTGTGGCGTATGCCCAAGCGTTGTTGTTAACTGGGTCTGCAAGGTGGTCAGCAAGGTTCTCTAATGGGCCCTTTCCAGTAACAAT
GGCTTGAACAAAGAATCCGAACATAGAGAACATGGCGAGTCTTCCGTTCTTAATCTCTTTTACCTTGAGCTCAGCGAATGCCTCTGGATCCTCAGCAAGG
CCCAATGGGTCAAAGCTACCACCAGGGTAAAGTGGGTCGACAACCTCACCAAGAGGCCCACCAGCAACACGGTAACCCTCAACGGCTCCCATCAAGATAA
CTTGGCAAGCCCAGATGGCCAAGATGCTTTGTGCATGGACCAAGCTTGGGTTGCCCAAGTAGTCAAGTCCACCCTCGCTAAAGATTTGGGATCCAGCCTT
GAACCACACAGCCTCGCCAAACTTGACACCATTACGAGCCAAGAGCTCGGGGAAGACACATCCAAGAGCACCAAGCATAGCCCATCTGCAGTGGATCACC
TCAAGTTCACGGTTCTTGGCAAAGGTTTCTGGGTCTGCTGAAAGTCCAGCAGTATCCCACCCGTAATCACCAGGGAATTCACCGGTCAAGTAGCTTGGAG
ACTCACCGGAGAATGGGCCCAAGTACTTAACACGGTCTGGACCGTACCATGGGCTGCTAGATGCGACGGGTTTGGCGACGGTCTTTCTCATGGACACCCT
TCCATTTCCAGTGATTTCTGAGGCAGATGGGGAGAGTTTCACTGCCTGTCCAGCAAAAGAAGGGGAAGAAAGAGCCATTGTAGAAGCTGCCATGGTTTAT
CAAGAGGAGAGTGAGAGGTTGCTGGTGTGATATGTCAAAGTTGGTTGT