Detailed information on CNT30709739


BLAST search results

BLAST vs Swiss-Prot:
sp|P09756|CB23_SOYBN, E-value = 4e-159

BLAST vs NONCODE:
NONBNAT005173, E-value = 2e-69

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641326Glycine maxNymphaea colorata57.4148.8883.33546forward
CNT30534338Glycine maxEucalyptus grandis57.9448.8985.48551forward
CNT30315824Glycine maxCorylus avellana58.7852.8987.3559forward
CNT30373848Glycine maxArabidopsis thaliana40.5936.8785.23386forward
CNT30500907Glycine maxCoffea canephora56.4757.3784.36537forward
CNT30616124Glycine maxSesamum indicum53.8444.8784.96512forward
CNT3098874Glycine maxSolanum tuberosum56.6852.0882.93539forward
CNT30508800Glycine maxSolanum lycopersicum56.3657.4584.33536forward
CNT30145222Glycine maxMedicago truncatula42.276085.32402forward
CNT30119285Glycine maxCitrus clementina57.3160.9685.5545forward
CNT30337332Glycine maxCynara cardunculus56.9941.0384.5542forward
CNT30725255Glycine maxLupinus angustifolius56.6853.985.16539forward

Expression of CNT30709739

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAHLEWITSSSRFLAKVSGSAESPAVSQP*

>peptide 2 (30 aa)
MGFLRRPACFTALPAKDGDERAMEEAAAIF*

>peptide 3 (32 aa)
MANRPFLSSFTLSSAKASGSSARPNGSKLPPG*

Sequence

>CNT30709739
GGCGTCAAAAGCTTAGAAGTATAAAATGAGAGAACAAATTGACACTTGAGTTTTGTAAAAAGCAAGTAACATTAAGTTGGATTCGGATACACAAGATAAT
TCACATTATCTGAAGTACTTCACCAAACACAAATCTAAAAACTCTCAAAAGTCATTTCGTTCTTTGACGCTCACTTTCCGGGGACGAAGTTGGTGGCATA
GGCCCAGGCGTTGTTGTTGACAGGGTCAGCAAGGTGATCGGCGAGGTTCTCCAATGGACCCTTTCCGCCAAACATAGAGAACATGGCCAATCGTCCGTTC
TTGAGTTCCTTCACCTTAAGCTCAGCAAAAGCCTCTGGGTCATCAGCAAGGCCCAATGGGTCGAAGCTGCCACCTGGGTAGATTGGGTCAGTGACCTCAC
CGAGGGGGCCACCAGCAATACGGTAACCTTCAACGGCACCCATTAGGATAACTTGTGTGGCCCAGATGGCGAGGATGCTCTGGGCGTGGATCAGGCTTGG
GTTGCCCAAGTAGTCGAGCCCACCCTCGCTGAAGATCTGGGACCCGGCCTTGAACCACACGGCTTCTCCGAACTTCACCCCGTTGCGGGACAGCAACTCC
GGGAAGACGCAGCCCAAGGCTCCGAGCATGGCCCACCTGGAGTGGATCACTTCGAGTTCACGGTTCTTGGCGAAGGTTTCTGGGTCTGCGGAAAGCCCAG
CAGTGTCCCAGCCGTAGTCGCCTGGGAACTCACCGGTTAGGTAGGACGGGGGCTCGCCAGAGAATGGGCCCAAGTACTTGACTCGGTCTGGGCCGTACCA
TGGGCTTCCTGAGGAGACCTGCTTGCTTCACGGCCTTGCCAGCCAAGGATGGGGATGAGAGAGCCATGGAAGAAGCTGCTGCCATTTTTTAACTCAAGGA
TGAGCTTTGCTTTGTGCTTTGTGTTATGAGTGTTTTGAAGTGGTGAGTGAC