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Detailed information on CNT30269327

BLAST search results

BLAST vs Swiss-Prot:
sp|P07369|CB2G_SOLLC, E-value = 9e-144

BLAST vs NONCODE:
NONMTRT001605, E-value = 5e-63

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30315824	Chenopodium quinoa	Corylus avellana	60.23	49.86	81.97	527	forward
CNT30514020	Chenopodium quinoa	Juglans regia	38.29	37.85	83.58	335	forward
CNT30500907	Chenopodium quinoa	Coffea canephora	60.23	56.3	82.54	527	forward
CNT30616124	Chenopodium quinoa	Sesamum indicum	59.54	45.66	85.03	521	forward
CNT30728214	Chenopodium quinoa	Corchorus capsularis	45.49	47.27	83.42	398	forward
CNT30525395	Chenopodium quinoa	Phaseolus vulgaris	60.57	52.01	82.45	530	forward
CNT30628736	Chenopodium quinoa	Vigna unguiculata	56.8	67.16	85.71	497	forward
CNT30504491	Chenopodium quinoa	Nicotiana attenuata	58.51	54.01	86.13	512	forward
CNT3046617	Chenopodium quinoa	Prunus dulcis	47.77	60.84	84.21	418	forward
CNT30633568	Chenopodium quinoa	Capsicum annuum	58.86	55.38	85.05	515	forward
CNT3092178	Chenopodium quinoa	Solanum tuberosum	52.23	50.5	86.21	457	forward
CNT30562273	Chenopodium quinoa	Actinidia chinensis	55.09	48.64	83.61	482	forward
CNT30508817	Chenopodium quinoa	Solanum lycopersicum	58.17	51.31	83.69	509	forward
CNT30173248	Chenopodium quinoa	Trifolium pratense	50.06	66.57	84.02	438	forward
CNT30146180	Chenopodium quinoa	Medicago truncatula	60.57	55.21	85.09	530	forward
CNT30598305	Chenopodium quinoa	Fraxinus excelsior	36.57	46.85	85	320	forward
CNT30609649	Chenopodium quinoa	Gossypium raimondii	52	60.11	86.15	455	forward
CNT30623083	Chenopodium quinoa	Daucus carota	53.71	45.15	84.26	470	forward
CNT30621493	Chenopodium quinoa	Cajanus cajan	60.91	39.72	85.74	533	forward
CNT30359492	Chenopodium quinoa	Lactuca sativa	56.11	57.43	83.91	491	forward
CNT30153357	Chenopodium quinoa	Prunus persica	47.77	23.67	84.21	418	forward
CNT30409978	Chenopodium quinoa	Papaver somniferum	43.89	40.25	82.03	384	forward
CNT30705057	Chenopodium quinoa	Prunus avium	59.31	62.76	82.47	519	forward
CNT30119285	Chenopodium quinoa	Citrus clementina	60.91	59.62	81.61	533	forward
CNT30337332	Chenopodium quinoa	Cynara cardunculus	60.57	40.12	83.96	530	forward
CNT30725255	Chenopodium quinoa	Lupinus angustifolius	60.57	53	84.53	530	forward

Expression of CNT30269327

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MVILPPPRMFNSEAELCLIACPAIVKRAS*

>peptide 2 (54 aa)
KIRILNIHSIIKHMYIEAYKAQIVTPLIHFHYIHTKILHLPGTKLVAYDQALLT*

>peptide 3 (31 aa)
MGQSYPRGKVDRLLHQVDHRQHGNPQRHPSR*

>peptide 4 (29 aa)
MAHLQWITSSSRFLAKVSGSADRPAVSQP*

Sequence

>CNT30269327
CAAAATTCGCATTTTGAACATTCATTCAATAATCAAACACATGTACATTGAAGCATATAAAGCTCAAATTGTTACACCTTTGATTCATTTTCACTACATT
CATACTAAAATACTTCACTTGCCGGGAACGAAGTTGGTGGCGTATGACCAAGCATTGTTAACATAGCCAACCTACCGTTCTTAATCTCCTTAACCTTCAA
CTCGGCGAAGGCCTCTGGGTCATCAGCCAAGCCCAATGGGTCAAAGCTACCCCCGGGGTAAAGTGGATCGACTACTTCACCAAGTGGACCACCGGCAACA
CGGTAACCCTCAACGGCACCCATCAAGATAACTTGGCAGGCCCAAATAGCCAAAATACTTTGGGCATGGATCAAACTTGGGTTACCCAAGTAGTCAAGCC
CACCCTCACTAAAGATTTGTGACCCAGCCTTGAACCAAACGGCCTCGCCGAACTTAACACCATTACGGGCCAATAGCTCGGGGAAAACACAGCCCAATGC
ACCCAACATGGCCCATCTGCAGTGGATCACCTCAAGCTCACGGTTCTTAGCAAAGGTCTCTGGGTCAGCGGATAGGCCCGCTGTGTCCCAACCATAGTCA
CCAGGAAATTCACCAGTGAGGTATGATGGGGCCTCACCTGAGAATGGGCCCAAATACTTAACACGGTCTGGGCCGTACCATGGGCTTCCTGATGATACAT
TTTTGGGCTTTGCTGCAGCTTTCCTCATGGTGATCCTTCCCCCACCTAGGATGTTTAATTCAGAGGCGGAGCTATGTTTAATTGCCTGTCCGGCCATTGT
TAAGAGGGCAAGCTAAGAACTCTAAAAAAAATTATGTAACAAGAATTTTTTTTTATTTTTTTTTTTATGTTTGTT