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Detailed information on CNT3046618


BLAST search results

BLAST vs Swiss-Prot:
sp|P07371|CB22_PEA, E-value = 1e-160

BLAST vs NONCODE:
NONMTRT001605, E-value = 1e-51

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30534609Prunus dulcisEucalyptus grandis71.5354.8183.11598forward
CNT30315824Prunus dulcisCorylus avellana78.3561.9783.97655forward
CNT30514020Prunus dulcisJuglans regia38.7636.6187.04324forward
CNT30702989Prunus dulcisQuercus lobata78.5968.879.6657forward
CNT30500907Prunus dulcisCoffea canephora80.0271.4781.91669forward
CNT30616124Prunus dulcisSesamum indicum76.6756.1882.06641forward
CNT30404043Prunus dulcisBeta vulgaris58.4944.3380.57489forward
CNT30525395Prunus dulcisPhaseolus vulgaris78.2364.1884.25654forward
CNT30628736Prunus dulcisVigna unguiculata68.0676.8984.36569forward
CNT30504491Prunus dulcisNicotiana attenuata79.970.4682.49668forward
CNT30709101Prunus dulcisGlycine max59.0958.0584.41494forward
CNT30633494Prunus dulcisCapsicum annuum79.4372.6582.38664forward
CNT3091778Prunus dulcisSolanum tuberosum79.4372.4181.78664forward
CNT30562269Prunus dulcisActinidia chinensis75.7266.5681.99633forward
CNT3088186Prunus dulcisVigna radiata78.3560.0981.98655forward
CNT30508817Prunus dulcisSolanum lycopersicum79.4366.9481.63664forward
CNT30146374Prunus dulcisMedicago truncatula79.0770.3281.54661forward
CNT30310534Prunus dulcisCamelina sativa75.653.3880.06632forward
CNT30609649Prunus dulcisGossypium raimondii66.2773.1883.03554forward
CNT30714756Prunus dulcisMalus domestica golden64.355383.27538forward
CNT30623258Prunus dulcisDaucus carota78.3566.4383.97655forward
CNT30621493Prunus dulcisCajanus cajan78.2348.7383.64654forward
CNT30359492Prunus dulcisLactuca sativa74.6472.9883.81624forward
CNT30153357Prunus dulcisPrunus persica10047.3497.37836forward
CNT30429024Prunus dulcisPapaver somniferum78.9553.6181.67660forward
CNT30572261Prunus dulcisVitis vinifera27.2727.8787.28228forward
CNT30119285Prunus dulcisCitrus clementina78.7173.682.98658forward
CNT30176340Prunus dulcisVigna angularis43.6639.3382.47365forward
CNT30337332Prunus dulcisCynara cardunculus77.9949.3684.66652forward
CNT30725332Prunus dulcisLupinus angustifolius78.3563.5983.82655forward

Expression of CNT3046618

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MDNFKLTVLGKGLWVSREPSSVPTVIAGEFSSEVRRGLARERAQVFDTVGAVPRTAG*

>peptide 2 (58 aa)
MACTKKPNMENMASLPFFSSFTFSSAKASGSSARPNGSKLPPGYNGSVISPRGPPATL*

>peptide 3 (29 aa)
MAHLEWITSSSRFLAKVSGSAESPAVSQP*

Sequence

>CNT3046618
TTTTTACTCCAAGAAATTGTTGATGTATTCTTTTGCACTGCTGACACCCAAGTAAGTTTCATAAAAATAACACATTAACAGAAATCCTGTTTCACAACAA
TTATTACAAATCTGCTTCTCTCTCTCAAAGTTCTCAGCCTCACTTTCCAGGAACAAAGTTTGTGGCATATGACCAAGCATTGTTGTTAACAGGGTCAGCC
AAGTGGTCAGCCAAGTTCTCTATTGGTCCCTTTCCTGTAACAATGGCCTGCACAAAGAAACCAAACATGGAAAACATGGCCAGTCTTCCATTCTTCAGCT
CCTTCACCTTCAGCTCAGCGAAAGCCTCTGGATCCTCTGCAAGACCTAATGGGTCAAAGCTCCCACCTGGATATAATGGGTCAGTGATCTCTCCGAGAGG
CCCACCTGCAACTCTGTAACCTTCCACTGCACCCATCAAGATAACTTGTGTGGCCCAAATTGCCAAAATGCTTTGGGCATGGACTAAGCTTGGGTTTCCC
AAGTAGTCTAGCCCACCCTCACTGAATATCTGGGCTCCAGCCTTGAACCATACAGCCTCACCGAACTTGACCCCGTTACGGGACAAGAGTTCAGGGAAAA
CGCAGCCCAGAGCACCGAGCATGGCCCATCTTGAATGGATAACTTCAAGCTCACGGTTCTTGGCAAAGGTCTCTGGGTCAGCCGAGAGCCCAGCAGTGTC
CCAACCGTAATCGCCGGGGAATTCTCCAGTGAGGTAAGAAGGGGCCTCGCCAGAGAACGGGCCCAAGTATTTGACACGGTCGGGGCCGTACCACGGACTG
CTGGATGAAACATTTTTGGACTTGGATGCGGTTTTG