Detailed information on CNT30167183


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39613|CYPH_CATRO, E-value = 6e-78

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30569495Pistacia veraActinidia chinensis49.5254.7781.94310forward
CNT30145071Pistacia veraMedicago truncatula45.5361.2984.21285forward
CNT3075586Pistacia veraBrassica juncea35.341.7882.81221forward
CNT30597524Pistacia veraFraxinus excelsior10.3830.6686.1565forward
CNT30128639Pistacia veraCorymbia citriodora22.5228.681.56141forward
CNT30364838Pistacia veraSorghum bicolor20.4525.5582.03128forward

Expression of CNT30167183

Peptides detected in this lncRNA

>peptide 1 (39 aa)
LRNTHEKLETPTSYFKHTQSVMIDYNMIMIIIIIEIYDL*

>peptide 2 (30 aa)
MVMSKNTLGLAMLQTNKETQKKLIRFVQCCF

Sequence

>CNT30167183
CTAAGAAATACACATGAGAAACTAGAGACACCCACATCATATTTTAAACATACTCAGTCCGTCATGATCGACTATAACATGATCATGATCATTATCATTA
TCGAAATCTACGATTTATAACATTTTTTTTAAATCTAAGACAATTGACCGCAGTCAGCAACCACAACGGGCTTCGAAGTCCTGCCGGAGCTGGACCCCAC
TTTCTCAATGGCCTTCACGACGTCCAGACCCTCAACCACCTGACCAAACACCACGTGCTTTCCGTCGAGCCACTCGGTCTTAGCGGTACAGACAAAGAAC
TGAGACCCGTTGATTGATTCACCTCCTGTGCCGTTTCCGGCAGTGAAGTCGCCTCCCTGGCACATGAAGCCGGGGATCACGCGATGGAAGCTTGATCCTT
TGTAGTGGAGTGGCTTGCCGGAGCGACCGACGCCTTTCTCGCCAGTGCAGAGAGCTCGGAAGTTCTCGGCGGTGCGAGGAGTGGTGTCCTGGAAGAGCTC
CATCACGATCCTTCCGGCCGGCTGACCGCCGATGGTCATGTCAAAAAACACCTTAGGGTTAGCCATGTTACAAACCAACAAAGAGACACAGAAAAAATTG
ATTAGATTTGTGCAGTGTTGTTTCGA