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Detailed information on CNT30140120


BLAST search results

BLAST vs Swiss-Prot:
sp|P93276|M030_ARATH, E-value = 2e-33

BLAST vs NONCODE:
NONSLYT003133, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524649Lolium perenneSetaria italica51.4651.8599.411709forward
CNT30619000Lolium perenneSesamum indicum29.8132.4194.44990forward
CNT30730481Lolium perenneCorchorus capsularis35.6896.3493.51185reverse complement
CNT30490123Lolium perenneOlea europaea15.8430.2197.15526forward
CNT30505430Lolium perenneNicotiana attenuata32.0445.3395.31064forward
CNT30712870Lolium perenneGlycine max13.0426.0595.61433forward
CNT30157603Lolium perennePistacia vera22.4378.0990.6745forward
CNT30185187Lolium perenneSecale cereale88.3582.9598.742934forward
CNT30292784Lolium perenneTriticum aestivum90.51100.2798.443006forward
CNT30223648Lolium perenneHordeum vulgare68.7496.1395.312283forward
CNT30394721Lolium perenneTriticum turgidum91.9683.3798.763054forward
CNT30543268Lolium perenneBrassica napus35.7751.7695.371188forward
CNT30435868Lolium perenneAegilops tauschii41.9810099.351394forward
CNT30242786Lolium perenneAvena sativa26.11100.1299.54867forward
CNT30670388Lolium perenneTriticum dicoccoides84.4310098.642804forward
CNT3017956Lolium perenneZea mays56.6153.398.031880forward
CNT30207637Lolium perenneHelianthus annuus32.1354.5594.381067forward
CNT30721631Lolium perenneTriticum spelta86.2482.4698.882864forward
CNT30360996Lolium perenneLactuca sativa32.173.0695.121066forward
CNT30434643Lolium perennePapaver somniferum22.64101.0893.35752forward
CNT3057903Lolium perenneAmborella trichopoda34.5447.8792.071147reverse complement
CNT30108930Lolium perenneOryza longistaminata52.3674.3299.831739forward
CNT3038420Lolium perenneCucumis melo20.3647.3497.34676forward
CNT30499372Lolium perenneDigitaria exilis55.8954.699.31856forward
CNT30603680Lolium perenneOryza punctata61.3151.5899.712036forward

Expression of CNT30140120

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MFDAIENHALDGCPGIEKEGRFQRRKAMGRERL*

>peptide 2 (33 aa)
MMSMARGRALNGLGWPPFRFTNPRETPNTGRHP*

>peptide 3 (41 aa)
MHWMDARALRRKDAFRGERPWGESVCDPWISDRETVSKLRG*

>peptide 4 (45 aa)
MSNEKSCEKHDRLPVEGFLRSVNLRRVNRSLRNPRKGCRPMGTRK*

>peptide 5 (79 aa)
MSAKAVALPYTRIRFLAGADTDFSLKAKTLKWANTRPSGRTCRLRLRAPADTFRSTFTCEPKSSCPFLSHFSPRLFHLP*

>peptide 6 (50 aa)
MTTRRWAWKQPSFEESVIAHWSSSMAPKMSQGSSDSPKRRDLESSFFKCQ*

>peptide 7 (45 aa)
MMEKPASSKRRLCCRSAPYGVVQSQQPFWGASIGNTGLMTGWGAQ*

Sequence

>CNT30140120
TTGGATTCCGGATTACAACACTATAGGCAATGAACCACCACTAACGGCCCATAACGTTAGCTGATAGCCGCTGACCGTGGAGTACTTGCCGATCCATCAG
CGAGGACTGTATCATTTAGCGAGCTAGCCTCCTTAAGGAACATGTATGTGAGAGTTCCACTTTAGCTCCCTCAACACCAGGCGGGACGAGCAGCCCTATA
CCACGCGTAGCCACACTCGTCTGTCCTTTTCTACTTAGTTGGACAGATCACTTCATAAAATCGTATCAAAATCAAGCAAGAAAACGGATGCGCTAACGCG
CAACGGCTTTCGCGCTAGTTGCTCAATCCGTTGCTTGCTTCTCTTCTGTCTTGGAAAAGTGAGGATTTCCTATCTGATCCAAGGGAAGGAAGAGAGGTGG
AAAGTGTTGCTGTGTCAAATCGAGATTGTGTGGGTGTTCAGTCTACCGCTCATGTTCGACGCTATCGAAAATCATGCATTGGATGGATGCCCGGGCATTG
AGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAGAGAGCGTCTGTGATCCATGGATCTCCGATCGGGAAACCGTATCCAAGCTCCGTGGCTAGT
CTGCGCTCTTTGGACTTTTCAAACTTAGCGAACTGAAACATCTGAGTAGCTAAAGGAAGGAAAATCAACCGAGACCCCGTTAGTAGCGGCGAGCGAGAGC
GGAACAAGGGTTTTCATCAAAAGAAATCCGAAGCGGTTTCATTCGATTTGTTGTGGATTGGATGATGGAAAAACCAGCAAGCAGCAAGCGTAGGCTGTGT
TGCCGTAGCGCGCCCTACGGAGTTGTACAAAGTCAGCAACCGTTTTGGGGCGCAAGCATAGGCAACACAGGACTGATGACGGGGTGGGGCGCGCAGTGAA
CTGGTTTTCTAAAAAGATTGGAAGATCCGGCCAAAGAAGGTGATAGCCCTGTTCATTCGTTCCCATGGTTCGATCCTTCCCAGTAAAACGCGGCGTGTTC
GAATGATGATCGCTTTTACGCGAGAAAGGGGGACCACCCTCTAAGCCTAAGTATTCCTCAATGACCGATAGCGTACAAGTACCGTGAGGGAAAGGTGAAA
AGAACCCCAATCGGGGAGTGCAATAGAGAACCTGAGATCCGATGCGAACAATCAGTCGAAGGAGCGGAGCGCGGGCGCACTCACTCTAACGGCGTACCTT
TCGCATGATGGGTCAGCGAGGAAATGGGAACAGCGGCTTAAGCCATTAGGTGTAGGCGCTTTCCAGAGGTGGAAGATTTACGTTCTTCCTATTTGACCCG
AAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGAGGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCT
AGGGGTGAAAGGCCAACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGTATGATGTCGATGGCCCGAGGTAGAGCACTCAATG
GGCTAGGGTGGCCCCCATTTCGCTTTACCAACCCCAGGGAAACTCCGAATACAGGCCGTCATCCTTAGTACAGACAGACTGATTGGGTGCTAAGATCCAA
AGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAATCACTTAGTGGAAAAGGAAGTGATCGAGCGATGACAACCAGGAGGTGGGCTTG
GAAGCAGCCATCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAGCTCCATGGCACCGAAAATGTCTCAGGGCTCAAGTGATTCACCGAAGCGACGAGAC
CTTGAAAGCAGCTTTTTCAAGTGTCAGTAGCGGGACGTTCTGTCAATCGGGGAAGGTTTTTGGTGACAAGACCTGGAGATATCAGAAGTGAGAATGCTGA
CATGAGTAACGAGAAATCCTGTGAAAAACACGATCGCCTGCCAGTGGAAGGCTTTCTGCGTTCAGTCAATCTACGCAGAGTGAATCGGTCCCTAAGGAAC
CCCCGAAAGGGCTGCCGTCCGATGGGTACACGAAAGTGACGAAGTTGCTTTGACTACTGAACCATGCCTGGATCGTCGGAGCGAATTGGATGATCGGGCC
GAGGGCTGCCCCCTCTTCCCCTCGCTCTCCTTTCCTTAATATTCACCGTCGAGTCATCAAAGCCGTCAACTAATTCAGAGGGGCTCGGCTGGCCCGGTCG
CCCTACGCTACTGGCGCTTCCAAAGGCGAAGCTCTCGTCTTTGGCGACCAGCAAACGGAGGGCTAAAACCTGTAGTTTTGAAGCAAGGGATGAGCGCGAA
AGCCGTTGCGCTTCCGTACACGCGCATACGTTTTCTTGCTGGGGCGGACACGGATTTCTCTCTAAAGGCGAAGACTCTGAAGTGGGCGAACACTCGGCCC
AGCGGGCGAACATGCCGGCTCCGGCTCCGCGCACCTGCTGACACCTTTCGAAGCACTTTCACGTGTGAACCGAAGTCGTCTTGCCCCTTCCTTTCTCATT
TCAGTCCTCGCCTTTTTCATCTTCCGTAGGGGCCTTTAGTCTTTTGATTAGAGTAGAGGTCGCGAGAGAGCAGAGCGTACCGCCCTGCCATAGTCGCGAG
GATCTTAATAGTCGGTCGCGACTGTTGTCATAGTCAACGACGGTTGAAACTTCCAGGAAAAAACTTCGAATTGGGAGGGCGATCCTCCCGGTGAACTGAC
CGTACCCCAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCGTCGAGAGAACCATGTCGAAGGAACTCGGCAAAATGACCCCGTAACTTCGGGA
GAAGGGGTGCTCTCCTATCTTTTGATTAGGAAAGCGGCACATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT
GTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGTCGGAAGGAGAAGTGTGATAAGCTTTGAATGGAAGCCCCGGTAAACGGCGGCAGTAACTCTAACTG
TCCTAAGGTAGCGAAATTCCTTGTCGCATAAGTAGCGACCTGCACGAATGGTGTAACGACTGCCCCGCTGTCTCCGACATGGACCCGGTGAAATTGAATT
CTCTGTGAAGATGCGGAGTACCAACGGCTAGACGGTAAGACCCCGTGCACCTTGACTATAGCTTCGCAGTGACAACCTTGATCGAATGTGTAGGATAGGT
GGGAGGTGGTGACACACAACGACCAATCCTGAAAGACCACTCTTTCATCTAAGGATGCCTAACCGCCGCACCGATCATTCGGGGGGGCGGGACACTGCGA
GGTGGGTAGTTTATCTGGGGC