Detailed information on CNT3036529


BLAST search results

BLAST vs Swiss-Prot:
sp|A7Q0V4|METK5_VITVI, E-value = 7e-95

BLAST vs NONCODE:
NONORUT006297, E-value = 2e-21

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515028Cucumis meloJuglans regia80.1940.5284.59344forward
CNT30194995Cucumis meloPisum sativum68.330.7882.94293forward
CNT30225171Cucumis meloHordeum vulgare20.9836.2984.4490forward
CNT30508429Cucumis meloSolanum lycopersicum20.7536.0388.7689forward
CNT30310308Cucumis meloCamelina sativa31.2458.0182.84134forward
CNT30606743Cucumis meloGossypium raimondii24.9410.0284.11107forward
CNT30218668Cucumis meloKalanchoe fedtschenkoi19.8121.9687.0685forward
CNT30626924Cucumis meloDaucus carota38.9313.2485.03167forward
CNT30620812Cucumis meloCajanus cajan31.710.9583.82136forward

Expression of CNT3036529

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MLVLVQVSHATLLSGSWARQASRTASEIWSQSLSG*

>peptide 2 (35 aa)
MQPCCQDLGQGKHLELHLRSGHKACLGDPRSQTQK*

>peptide 3 (53 aa)
STILPHLGETSAELSSKDVTKGHQFWGLIRSIAEHVTLVTSTNFLRALLLDVD*

>peptide 4 (31 aa)
MLTKTLQLSASRPTSSEMNPMERQVSRTIFS*

Sequence

>CNT3036529
CAAGTACCATTCTTCCTCACCTCGGTGAGACGAGCGCCGAGCTTAGTAGCAAGGACGTGACTAAGGGGCATCAATTCTGGGGTCTCATCCGTAGCATAGC
CGAACATGTGACCCTGGTCACCAGCACCAATTTCCTCAGGGCTCTGCTGCTCGATGTTGACTAAGACCTTGCAGTTATCGGCATCAAGACCCACATCATC
CGAGATGAATCCAATGGAACGGCAAGTGTCTCGGACGATTTTCTCGTAGTCTACGTCCGCCTTGGTTGTAATCTCTCCAAAAACCATAACCATGTTGGTC
TTGGTGCAGGTTTCACATGCAACCTTGCTGTCAGGATCTTGGGCAAGGCAAGCATCTAGAACTGCATCTGAGATCTGGTCACAAAGCTTGTCTGGGTGAC
CCTCGTTCACAGACTCAGAAGTAAATAGA