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Detailed information on CNT30655738


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ZRB7|TBA_WHEAT, E-value = 4e-96

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30517711Triticum dicoccoidesJuglans regia31.840.3887.85214forward
CNT30702815Triticum dicoccoidesQuercus lobata24.3744.5785.98164forward
CNT30618173Triticum dicoccoidesSesamum indicum44.4337.787.96299forward
CNT30504799Triticum dicoccoidesNicotiana attenuata43.3974.6887.67292forward
CNT30284381Triticum dicoccoidesTriticum aestivum103.2790.9796.26695forward
CNT30382785Triticum dicoccoidesTriticum turgidum68.260.3294.77459forward
CNT30435101Triticum dicoccoidesAegilops tauschii45.4799.0393.79306forward
CNT3059767Triticum dicoccoidesArabidopsis lyrata34.3232.5884.85231forward
CNT30136973Triticum dicoccoidesLolium perenne47.776.4390.65321forward
CNT3041114Triticum dicoccoidesChlamydomonas reinhardtii25.5624.4787.79172forward
CNT30204030Triticum dicoccoidesHelianthus annuus30.1648.9286.7203forward
CNT30624589Triticum dicoccoidesDaucus carota15.7521.3788.68106forward
CNT30689745Triticum dicoccoidesTriticum urartu103.2791.2194.82695forward
CNT30597037Triticum dicoccoidesOryza meridionalis34.6244.4787.55233forward
CNT30430260Triticum dicoccoidesPapaver somniferum32.2437.2987.56217forward
CNT30333509Triticum dicoccoidesCynara cardunculus22.5927.6485.53152forward

Expression of CNT30655738

Peptides detected in this lncRNA

>peptide 1 (65 aa)
MPSPTYQWTKARLAYMRSNLWSMREKTSTTLVELEIMHTALWTLARSPPGTTPGGCQWGTSQQTG*

>peptide 2 (52 aa)
MVATAALTSLGTTSPRYMRQQAMYLPWRGSHLAIIDEGSKALLAFSAEITGA*

Sequence

>CNT30655738
GATAAAGCCACTCGGGCAGATCATGGGATAGCAGCAGCACGCCTTGGGAAAGCACCAGGAGGCAGGCTCTAGTACTCGTCGCCCTCGTCACCGTCCTCAC
CCTCGTCGAACTCAGCACCAACTTCTTCATAGTCCTTCTCCAGGGCAGCAAGATCCTCACGGGCCTCAGAGAACTCTCCCTCCTCCATGCCCTCACCGAC
GTACCAGTGGACGAAGGCACGCTTGGCGTACATGAGGTCAAACTTGTGGTCAATGCGGGAGAAGACCTCGACGACACTGGTGGAGTTGGAGATCATGCAC
ACAGCCCTCTGGACCTTGGCAAGGTCACCGCCTGGGACAACACCTGGTGGCTGCCAGTGGGGCACCAGTCAACAAACTGGATAGTGCGCTTGGTCTTGAT
GGTGGCCACAGCTGCGTTGACATCCTTGGGAACAACATCACCACGGTACATGAGACAGCAGGCCATGTACTTGCCATGGCGGGGGTCACACTTGGCCATC
ATAGATGAAGGCTCAAAGGCGCTGTTGGCCTTCTCAGCTGAGATCACTGGGGCATAGGAGGAAAGCATGAAGTGGATCCTCGGGTAGGGCACCAAGTTGG
TCTGGAATTCATTGACATCAACATTCAGAGCACCATCAAACCTCAGGGAAGCTGTCAGCGATGAAATGACCTG