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Detailed information on CNT30435101


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ZRR5|TBA3_HORVU, E-value = 3e-53

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30504799Aegilops tauschiiNicotiana attenuata98.0677.4984.49303forward
CNT30382785Aegilops tauschiiTriticum turgidum102.2741.5294.62316forward
CNT30655738Aegilops tauschiiTriticum dicoccoides99.0345.4793.79306forward
CNT30136973Aegilops tauschiiLolium perenne10073.5793.53309forward
CNT30689745Aegilops tauschiiTriticum urartu99.0340.1697.71306forward

Expression of CNT30435101

Peptides detected in this lncRNA

>peptide 1 (67 aa)
TLEASGAPVNKLNSALGLDGGHSSVDVLWHNITTVHETAGHVLAVAGVALGHHGRRLKGAVAEITGA*

>peptide 2 (53 aa)
MVATAALTSFGTTSPRYMRQQAMYLPWRGSHLAIMDEGSKALLLRSLGHRRKA*

Sequence

>CNT30435101
CACACTTGAAGCCAGTGGGGCACCAGTCAACAAACTGAATAGTGCGCTTGGTCTTGATGGTGGCCACAGCAGCGTTGACGTCCTTTGGCACAACATCACC
ACGGTACATGAGACAGCAGGCCATGTACTTGCCGTGGCGGGGGTCGCACTTGGCCATCATGGACGAAGGCTCAAAGGCGCTGTTGCTGAGATCACTGGGG
CATAGGAGGAAAGCATGAAGTGGATCCTCGGGTAGGGCACCAAGTTGGTCTGGAATTCATTGACATCAACATTCAGAGCACCATCAAACCTCAGGGAAGC
TGTCAGTGA