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Detailed information on CNT30284381


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ZRB7|TBA_WHEAT, E-value = 4e-132

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640127Triticum aestivumNymphaea colorata35.7334.2187.91273forward
CNT30517711Triticum aestivumJuglans regia28.0140.3887.85214forward
CNT30702815Triticum aestivumQuercus lobata21.4744.5785.98164forward
CNT30371538Triticum aestivumArabidopsis thaliana54.0686.9587.17413forward
CNT30618173Triticum aestivumSesamum indicum55.2453.2287.2422forward
CNT30727923Triticum aestivumCorchorus capsularis59.8238.688.4457forward
CNT30379228Triticum aestivumManihot esculenta57.250.1187.87437forward
CNT30709049Triticum aestivumGlycine max40.3144.4488.96308forward
CNT30177039Triticum aestivumSecale cereale72.9141.0295.69557forward
CNT30382785Triticum aestivumTriticum turgidum60.2160.4599.78460forward
CNT3086234Triticum aestivumVigna radiata36.5252.6487.1279forward
CNT30555352Triticum aestivumOryza glaberrima82.5969.887.32631forward
CNT30144939Triticum aestivumMedicago truncatula29.0645.5983.33222forward
CNT30247087Triticum aestivumAvena sativa59.8262.4394.53457forward
CNT30655738Triticum aestivumTriticum dicoccoides90.97103.2796.26695forward
CNT3059767Triticum aestivumArabidopsis lyrata30.2432.5884.85231forward
CNT30265526Triticum aestivumBrassica rapa54.0641.5987.17413forward
CNT30136973Triticum aestivumLolium perenne51.3193.3392.09392forward
CNT30624589Triticum aestivumDaucus carota13.8721.3788.68106forward
CNT30689745Triticum aestivumTriticum urartu91.7591.9998701forward
CNT30430260Triticum aestivumPapaver somniferum28.437.2987.56217forward
CNT3024728Triticum aestivumPopulus trichocarpa35.7333.6288.28273forward
CNT30103952Triticum aestivumOryza rufipogon82.5967.9287.48631forward
CNT30724701Triticum aestivumLupinus angustifolius57.4638.8887.7439forward

Expression of CNT30284381

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MVATAALTSLGTTSPRYMRQQAMYLPWRGSHLAIIDEGSKALLAFSAEITGA*

>peptide 2 (56 aa)
MPSPTYQWTKARLAYMRSNLWSMREKTSTTLVELEIMHTALWTLARSPPGTTPGGW*

Sequence

>CNT30284381
GACAGAGCAATTAAGGCTATGGTGTAGATAACCAGATAGCATGCATATTAACCAAGGTGCATAACAGATAAAGCCACTCGGGCAGATCATGGGATAGCAG
CAGCACGCCTTGCGAAAGCACCAGGAGGCAGGCTCTAGTACTCGTCGCCCTCGTCACCGTCCTCACCCTCGTCGAACTCAGCACCAACTTCTTCATAGTC
CTTCTCCAGGGCAGCAAGATCCTCACGGGCCTCAGAGAACTCTCCCTCCTCCATGCCCTCACCGACGTACCAGTGGACGAAGGCACGCTTGGCGTACATG
AGGTCAAACTTGTGGTCAATGCGGGAGAAGACCTCGACGACACTGGTGGAGTTGGAGATCATGCACACAGCCCTCTGGACCTTGGCAAGGTCACCACCTG
GGACAACACCTGGTGGCTGGTAGTTGATACCACACTTGAAGCCAGTGGGGCACCAGTCAACAAACTGGATAGTGCGCTTGGTCTTGATGGTGGCCACAGC
AGCGTTGACATCCTTGGGAACAACATCACCACGGTACATGAGACAGCAGGCCATGTACTTGCCGTGGCGGGGGTCACACTTGGCCATCATAGATGAAGGC
TCAAAGGCGCTGTTGGCCTTCTCAGCTGAGATCACTGGGGCATAGGAGGAAAGCATGAAGTGGATCCTCGGGTAGGGCACCAAGTTGGTCTGGAATTCAT
TGACATCAACATTCAGAGCACCATCAAACCTCAGGGAAGCTGTCAGCGATGAAATGACCTGCAC