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Detailed information on CNT30382785


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ZRB7|TBA_WHEAT, E-value = 3e-103

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618173Triticum turgidumSesamum indicum53.0950.9587.38404forward
CNT30504799Triticum turgidumNicotiana attenuata47.792.8486.78363forward
CNT30284381Triticum turgidumTriticum aestivum60.4560.2199.78460forward
CNT30435101Triticum turgidumAegilops tauschii41.52102.2794.62316forward
CNT30655738Triticum turgidumTriticum dicoccoides60.3268.294.77459forward
CNT3075301Triticum turgidumBrassica juncea24.3134.8487.57185forward
CNT30219368Triticum turgidumKalanchoe fedtschenkoi30.2239.3886.52230forward
CNT30689745Triticum turgidumTriticum urartu60.3260.2497.82459forward
CNT30720142Triticum turgidumTriticum spelta22.4747.7798.25171forward
CNT30570163Triticum turgidumVitis vinifera41.1337.887.86313forward
CNT3024735Triticum turgidumPopulus trichocarpa18.7926.4887.41143forward

Expression of CNT30382785

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MVATAALTSLGTTSPRYMRQQAMYLPWRGSHLAIIDEGSKALLAFSAEITGA*

>peptide 2 (34 aa)
MREKTSTTLVELEIMHTALWTLARSPPGTTPGGW*

Sequence

>CNT30382785
AAACAATACAAATTAGTATAAAACAGGAAAACGGAGACAAATGGTGTAGATAACCAGATAGCATGCATATTAACCAAGGTGCATAACAGGTTCAAAGATA
CAAGGGTCTTACAACACAACAGGTTATAAAACAAACACCACAAAGCAAAGATTCAAACAGACAGATAACAGATAAAGCCACTCGGGCAGATCATGGGATA
GCAGCAGCACGCCTTGGGAAAGCACCAGGAGGCAGGCTCTAGTACTCGTCGCCCTCGTCACCGTCCTCACCCTCGTCGAACTCAGCACCAACTTCTTCAT
AGTCAAACTTGTGGTCAATGCGGGAGAAGACCTCGACGACACTGGTGGAGTTGGAGATCATGCACACAGCCCTCTGGACCTTGGCAAGGTCACCGCCTGG
GACAACACCTGGTGGCTGGTAGTTGATACCACACTTGAAGCCAGTGGGGCACCAGTCAACAAACTGGATAGTGCGCTTGGTCTTGATGGTGGCCACAGCA
GCGTTGACATCCTTGGGAACAACATCACCACGGTACATGAGACAGCAGGCCATGTACTTGCCGTGGCGGGGGTCACACTTGGCCATCATAGATGAAGGCT
CAAAGGCGCTGTTGGCCTTCTCAGCTGAGATCACTGGGGCATAGGAGGAAAGCATGAAGTGGATCCTCGGGTAGGGCACCAAGTTGGTCTGGAATTCATT
GACATCAACATTCAGAGCACCATCAAACCTCAGGGAAGCTGTCAGCGATGAAATGACCTGC