« Back to Quercus lobata search


Detailed information on CNT30702815


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640127Quercus lobataNymphaea colorata44.5720.5585.98164forward
CNT30535442Quercus lobataEucalyptus grandis26.93.6785.8699reverse complement
CNT30547493Quercus lobataIpomoea triloba44.5714.6785.98164forward
CNT30517711Quercus lobataJuglans regia44.5730.9490.24164forward
CNT30371538Quercus lobataArabidopsis thaliana42.9333.2688.61158forward
CNT3021397Quercus lobataCitrullus lanatus26.0914.589.5896forward
CNT30727924Quercus lobataCorchorus capsularis44.5717.1588.41164forward
CNT30379228Quercus lobataManihot esculenta44.5718.8189.63164forward
CNT30504800Quercus lobataNicotiana attenuata43.7536.4385.71161forward
CNT30712730Quercus lobataGlycine max36.4126.1791.04134forward
CNT30284381Quercus lobataTriticum aestivum44.5721.4785.98164forward
CNT30224654Quercus lobataHordeum vulgare44.8410.8183.03165forward
CNT30391523Quercus lobataTriticum turgidum44.5722.2582.32164forward
CNT3086234Quercus lobataVigna radiata43.7530.3883.23161forward
CNT30553152Quercus lobataOryza glaberrima44.5723.782.93164forward
CNT30144939Quercus lobataMedicago truncatula40.4930.685.91149forward
CNT30247087Quercus lobataAvena sativa44.5722.486.59164forward
CNT30655738Quercus lobataTriticum dicoccoides44.5724.3785.98164forward
CNT3059767Quercus lobataArabidopsis lyrata43.7522.7187.58161forward
CNT30265526Quercus lobataBrassica rapa43.7516.2186.96161forward
CNT30445850Quercus lobataSaccharum spontaneum44.8418.1386.06165forward
CNT30953Quercus lobataZea mays44.8417.4485.45165forward
CNT3041114Quercus lobataChlamydomonas reinhardtii26.914.0885.8699forward
CNT30229012Quercus lobataAnanas comosus44.8419.986.67165forward
CNT30219368Quercus lobataKalanchoe fedtschenkoi24.4615.4188.8990forward
CNT30204030Quercus lobataHelianthus annuus44.5739.5290.24164forward
CNT30689745Quercus lobataTriticum urartu44.5721.5286.59164forward
CNT30358630Quercus lobataLactuca sativa32.8830.8780.99121forward
CNT30482824Quercus lobataChara braunii27.9913.5387.38103forward
CNT30430260Quercus lobataPapaver somniferum44.5728.1887.8164forward
CNT30570286Quercus lobataVitis vinifera36.4127.2491.79134forward
CNT3024728Quercus lobataPopulus trichocarpa44.5720.287.8164forward
CNT30100887Quercus lobataOryza rufipogon43.4820.7883.12160forward
CNT30582828Quercus lobataEchinochloa crusgalli44.8419.2385.45165forward
CNT30558847Quercus lobataPanicum hallii22.8311.3889.2984forward
CNT30333509Quercus lobataCynara cardunculus29.892085.45110forward
CNT30724701Quercus lobataLupinus angustifolius43.7514.2690.06161forward

Expression of CNT30702815

Sequence

>CNT30702815
CTCCACAAATTAAAAACCAACGATAAAACAAGTATCAAACAGCAATAACATCAGTCTGGGTAGGATAAAATTGGGAACAACTGAGATTTGTTGCACACAT
ACACAAACATTATAAGGCAGACCAAAAGATGATACTACCCAAACAAAAAACAAACTACCATCTCAGCAACTAGTTAAAATCCTTAATACTCATCGCCTTC
ATCGTCCTCACGGGCTTCAGAGAATTCTCCTTCCTCCATACCCTCACCCACGTACCAGTGCACAAAAGCACGCTTGGCATACATGAGATCAAATTTGTGG
TCAATACGGGAGAACACTTCAGCCACAGAGGTAGAGTTTGAGATCATGCAAACAGCCCTCTGCACCTT