Detailed information on CNT3038888


BLAST search results

BLAST vs Swiss-Prot:
sp|P25794|PIP2_PEA, E-value = 4e-68

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671777Cucumis meloSetaria viridis5.5121.5187.7257forward
CNT30519732Cucumis meloSetaria italica7.7327.8783.7580forward
CNT30316259Cucumis meloCorylus avellana13.5343.8982.86140forward
CNT30549105Cucumis meloIpomoea triloba13.6224.7885.82141forward
CNT30728342Cucumis meloCorchorus capsularis13.5321.2182.86140forward
CNT30565299Cucumis meloActinidia chinensis8.7938.8990.1191forward
CNT30590722Cucumis meloMusa acuminata11.5927.2784.17120forward
CNT3085716Cucumis meloVigna radiata15.9453.5783.03165forward
CNT30234760Cucumis meloBrassica oleracea13.0444.2682.22135forward
CNT30463151Cucumis meloSaccharum spontaneum13.2427.2481.75137forward
CNT30607958Cucumis meloGossypium raimondii8.8922.8384.7892forward
CNT30646773Cucumis meloRosa chinensis12.3734.6981.25128forward
CNT30713155Cucumis meloMalus domestica golden8.4134.2583.9187forward
CNT30365858Cucumis meloSorghum bicolor13.2437.8581.75137forward
CNT30325169Cucumis meloAsparagus officinalis13.9154.3483.33144forward
CNT30120255Cucumis meloCitrus clementina8.0228.1485.5483forward
CNT30101140Cucumis meloOryza rufipogon5.2220.6190.7454forward
CNT3050457Cucumis meloCucumis sativus41.2674.2695.78427forward

Expression of CNT3038888

Peptides detected in this lncRNA

>peptide 1 (54 aa)
FLKTLHEKRKEREKKNKTMQRQLRIDKSHKAGKRRVGIIISTFFFREINHYIAS*

>peptide 2 (30 aa)
MALITTWWYRAARAAPMKGPTQNIHCNLAT*

>peptide 3 (43 aa)
MAAPKLRAGLMPKIALVNDSFLARNSPKVTAGLMCPPEIPAVQ*

Sequence

>CNT3038888
TTTTTCTCAAAACCCTACATGAAAAAAGAAAAGAGCGAGAAAAGAAAAACAAAACAATGCAACGACAATTAAGAATTGACAAGTCGCATAAAGCAGGTAA
AAGGAGAGTGGGTATCATTATTTCAACTTTTTTTTTTCGGGAAATTAACCATTACATAGCTTCATAGCCACACATATAATTACAGATAACACTGCACTCC
CTTAACAATTGGGTCCCAAAGTTGAAATTTTAAAAACCATTAGAGAAAAAAAAAATACAACACAAAAGGGGAAAACAGCCTTCTTTTTTCTTCTTTTCGG
ATCGGACGGCTGTGATTGATTGAAGAAGCATCATGGATTTAGATAAGATTTTCACTTGGACTTGAAAGGGATGGCTCTGATTACAACTTGGTGGTACAGA
GCTGCAAGAGCAGCGCCGATGAAAGGTCCCACCCAGAATATCCACTGTAATTTAGCCACATAATCATGTTATGTTTAACATTTAACATTAAGATTATTAA
AGTTTATGAGATTAAGAAACTCACGTGATCATCCCATGCTTTCTCGTTGTTGTAAATAATGGCGGCTCCCAAGCTCCGGGCTGGGTTGATGCCGAAAATC
GCCCTAGTCAACGACAGCTTCCTCGCCAGAAACAGCCCGAAAGTCACCGCCGGGTTAATGTGCCCACCGGAAATTCCAGCAGTACAGTAAACCAGAGCAA
AAATCATACCGCCGAATGCCCAAGCAATACCCTGAATTCCGACTGTCTTACACGTGTTCCCCTCAATATTCTTGGACCGGACGACACCCATGACGGTCAA
AACGGTGATGTAGAGGAAGAGGAAAGTAGCGAAAAACTCGGCAATTCCAGCTCTGTAGAAGGACCATGAAGTGAGCTCTTCTGGCTCAAACAACGGGGCC
GGCGGTGGCTCCTTGTAGTCCTTAGCGTCATCTTGACTCTGGGCCGCCGTTCCAATCGGCTGTCTCTCGTTGAATTTGTTAGCTCCAAGTCTAACATCTT
CCTCCTTCCCTTCCATTTCGGAAAAACTTATCTGT