Detailed information on CNT30120255


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317557Citrus clementinaCorylus avellana28.8119.2787.0685forward
CNT30565299Citrus clementinaActinidia chinensis26.132.9185.7177forward
CNT3054194Citrus clementinaAmborella trichopoda28.811.4985.8885forward
CNT3038888Citrus clementinaCucumis melo28.148.0285.5483forward
CNT30176309Citrus clementinaVigna angularis27.4617.5385.1981forward

Expression of CNT30120255

Peptides detected in this lncRNA

>peptide 1 (64 aa)
RTSFVHIITKMTLHKSTAIQMYKVTAPTYLAMGPSVIIIDLSSKKKKKRFKEGKHRSRCNHERR*

>peptide 2 (33 aa)
MKRSASFEGNGSDHDLVVQSCKSSSNEWSHPENP

Sequence

>CNT30120255
ATAGAACTAGTTTTGTCCATATTATTACCAAGATGACATTGCACAAATCCACAGCCATACAAATGTACAAAGTGACAGCGCCCACCTACTTAGCCATGGG
CCCATCCGTCATCATCATCGACCTCTCTTCAAAAAAAAAAAAAAAACGTTTTAAGGAAGGAAAACACAGAAGCAGGTGCAATCACGAACGTCGATGAAGC
GATCAGCTTCATTTGAAGGGAATGGCTCTGATCACGACTTGGTGGTACAAAGCTGCAAGTCCAGCTCCAACGAATGGTCCCACCCAGAAAATCCA