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Detailed information on CNT30713155


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671134Malus domestica goldenSetaria viridis36.6136.3384.9593forward
CNT30504332Malus domestica goldenNicotiana attenuata34.6525.6689.7788forward
CNT30565299Malus domestica goldenActinidia chinensis37.0140.1787.2394forward
CNT30590285Malus domestica goldenMusa acuminata36.618.7287.193forward
CNT30217604Malus domestica goldenKalanchoe fedtschenkoi29.9210.6388.1676reverse complement
CNT30681640Malus domestica goldenTriticum urartu35.837.7684.6291forward
CNT30479061Malus domestica goldenArabidopsis halleri33.4628.1584.7185forward
CNT30364938Malus domestica goldenSorghum bicolor36.6110.1483.8793forward
CNT30570878Malus domestica goldenVitis vinifera22.0512.4791.0756forward
CNT30320106Malus domestica goldenAsparagus officinalis31.54.488580forward
CNT3038888Malus domestica goldenCucumis melo34.258.4183.9187forward

Expression of CNT30713155

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MSIPGLEWDGSDDYLMVECSKCSSDEWSDPEDPL

Sequence

>CNT30713155
TAAATTAAATAAAGTTTTCCATTAATGTAACAGGATAAATAACTAATATGCACATTAGCACCCCAAATACTCCACTCTCGACATTAAAACACAACGAACG
AAATAAACACAATCGCAGCATTTAGACAGAACAAGGCCCGACGGGGATTACCATGTCAATCCCTGGTCTTGAATGGGATGGCTCTGATGACTATCTGATG
GTAGAGTGCAGCAAGTGCAGCTCCGATGAATGGTCCGACCCAGAAGATCCACTG