Detailed information on CNT30101140


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30531266Oryza rufipogonEucalyptus grandis29.3918.287.0177forward
CNT30517210Oryza rufipogonJuglans regia22.99.3386.6760forward
CNT3020673Oryza rufipogonCitrullus lanatus21.375.2787.556forward
CNT30159576Oryza rufipogonPistacia vera36.6412.1283.3396forward
CNT30568278Oryza rufipogonActinidia chinensis28.6315.2190.6775forward
CNT30586754Oryza rufipogonMusa acuminata36.6435.5691.6796forward
CNT30213185Oryza rufipogonHelianthus annuus21.7610.3191.2357forward
CNT30477240Oryza rufipogonArabidopsis halleri31.6814.4184.3483forward
CNT30365858Oryza rufipogonSorghum bicolor24.4317.6895.3164forward
CNT3038888Oryza rufipogonCucumis melo20.615.2290.7454forward
CNT30112149Oryza rufipogonFicus carica28.249.4387.8474forward
CNT3039904Oryza rufipogonMarchantia polymorpha28.244.3985.1474forward

Expression of CNT30101140

Peptides detected in this lncRNA

>peptide 1 (85 aa)
RDVGVAGIALWVGGGEDGVDEDEGADDFGAEGGAGGVAAGHHVGAAAALRHDVHHRANHRHLPRQQQPERHRGVNVPSCTPRMAKF

>peptide 2 (44 aa)
MLAPPPHCATMYITARITDTFLASSSPNVTAGLMCPPARHAWPNL

Sequence

>CNT30101140
ACCGGGACGTGGGAGTCGCGGGCATTGCGCTTTGGGTCGGTGGCGGAGAAGACGGTGTAGACGAGGACGAAGGTGCCGATGATTTCGGCGCCGAGGGCGG
TGCCGGTGGAGTAGCCGCTGGCCACCATGTTGGCGCCGCCGCCGCACTGCGCCACGATGTACATCACCGCGCGAATCACCGACACCTTCCTCGCCAGCAG
CAGCCCGAACGTCACCGCGGGGTTAATGTGCCCTCCTGCACGCCACGCATGGCCAAATTTAG