Detailed information on CNT30565299


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30504332Actinidia chinensisNicotiana attenuata37.1825.3688.5187forward
CNT30607958Actinidia chinensisGossypium raimondii38.8922.5885.7191forward
CNT30713155Actinidia chinensisMalus domestica golden40.1737.0187.2394forward
CNT30479061Actinidia chinensisArabidopsis halleri33.3325.8387.1878forward
CNT3054194Actinidia chinensisAmborella trichopoda34.191.488.7580forward
CNT30320106Actinidia chinensisAsparagus officinalis32.914.3185.7177forward
CNT30120255Actinidia chinensisCitrus clementina32.9126.185.7177forward
CNT3038888Actinidia chinensisCucumis melo38.898.7990.1191forward

Expression of CNT30565299

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MRQEETQGGVNLGPGLERNGSDDNLVVHSSKSSSDEWSHPEYPL

>peptide 2 (49 aa)
ETQGGVNLVNTSTPSPHEDSKKIHCKGSSEKNKDETRGDSRGGELRPWT*

Sequence

>CNT30565299
AGGAGACTCAAGGGGGGGTGAACTTAGTTAACACCTCAACACCAAGTCCACACGAAGACAGCAAAAAAATACACTGCAAAGGGAGTAGCGAAAAGAATAA
GGATGAGACAAGAGGAGACTCAAGGGGGGGTGAACTTAGGCCCTGGACTTGAAAGGAATGGCTCTGATGACAATCTGGTGGTACACAGCAGCAAGAGCAG
CTCCGATGAATGGTCCCACCCAGAATACCCACTG