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Detailed information on CNT30325169


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691492Asparagus officinalisOryza sativa71.3224.980.95189forward
CNT30676186Asparagus officinalisSetaria viridis67.1739.4785.96178forward
CNT30519732Asparagus officinalisSetaria italica69.0663.7684.7183forward
CNT30640424Asparagus officinalisNymphaea colorata4012.7684.91106forward
CNT30316259Asparagus officinalisCorylus avellana41.1334.1782.57109forward
CNT30549105Asparagus officinalisIpomoea triloba41.5119.3383.64110forward
CNT3020673Asparagus officinalisCitrullus lanatus32.838.1887.3687forward
CNT30629601Asparagus officinalisVigna unguiculata23.0213.5386.8961forward
CNT30297784Asparagus officinalisTriticum aestivum27.558.3386.373forward
CNT30221132Asparagus officinalisHordeum vulgare26.7930.7488.7371forward
CNT30394052Asparagus officinalisTriticum turgidum27.555.186.373forward
CNT30564991Asparagus officinalisActinidia chinensis61.5140.3584.66163forward
CNT30590223Asparagus officinalisMusa acuminata77.7427.1184.47206forward
CNT3085023Asparagus officinalisVigna radiata2010.9588.6853forward
CNT30542732Asparagus officinalisBrassica napus22.268.7889.8359forward
CNT30437220Asparagus officinalisAegilops tauschii38.1117.6686.14101forward
CNT30463151Asparagus officinalisSaccharum spontaneum43.0222.6689.47114forward
CNT30131632Asparagus officinalisLolium perenne63.7777.1784.02169forward
CNT30232947Asparagus officinalisAnanas comosus33.9637.9786.6790forward
CNT30622764Asparagus officinalisDaucus carota24.5314.8486.1565forward
CNT30680472Asparagus officinalisTriticum urartu4015.2185.85106forward
CNT30478156Asparagus officinalisArabidopsis halleri23.421.7587.162forward
CNT30365858Asparagus officinalisSorghum bicolor67.5549.4587.15179forward
CNT30595794Asparagus officinalisOryza meridionalis76.2392.2486.63202forward
CNT30706529Asparagus officinalisPrunus avium76.2313.1380.69202forward
CNT3024898Asparagus officinalisPopulus trichocarpa21.1310.8189.2956forward
CNT3038888Asparagus officinalisCucumis melo42.6410.9284.07113forward
CNT30116072Asparagus officinalisOryza nivara68.322.0586.19181forward
CNT30603734Asparagus officinalisOryza punctata71.3214.3982.01189forward
CNT30176173Asparagus officinalisVigna angularis23.022086.8961forward
CNT3050391Asparagus officinalisCucumis sativus42.6417.7784.96113forward

Expression of CNT30325169

Peptides detected in this lncRNA

>peptide 1 (30 aa)
QRCSRQERRSCPQKPRRSPESRRWSTWKGT*

>peptide 2 (83 aa)
SSGAVDKSEDHAPKSPGDPLNPDGGALGRGLDDTHDGQNGDVKEEEGGDELSDPCSVEGPRLELPGLKQGGWGRLFVVLVRLG*

Sequence

>CNT30325169
TCCAGCGGTGCAGTAGACAAGAGCGAAGATCATGCCCCCAAAAGCCCAGGCGATCCCCTGAATCCCGACGGTGGAGCACTTGGAAGGGGACTTGACGACA
CCCATGACGGTCAGAATGGAGATGTAAAGGAAGAGGAAGGTGGCGATGAACTCAGCGATCCCTGCTCTGTAGAAGGACCACGACTTGAGCTCCCCGGGCT
CAAACAGGGGGGCTGGGGGCGGCTCTTTGTAGTCCTTGTCCGTTTGGGCTGAGGTGCCTATGGGC