« Back to Malus domestica golden search


Detailed information on CNT30715236


BLAST search results

BLAST vs Swiss-Prot:
sp|O22342|ADT1_GOSHI, E-value = 4e-77

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618446Malus domestica goldenSesamum indicum37.818.6281.04211forward
CNT3020944Malus domestica goldenCitrullus lanatus49.6466.5985.56277forward
CNT30162003Malus domestica goldenPistacia vera53.0562.1880.41296forward
CNT30314202Malus domestica goldenCamelina sativa19.5327.5985.32109forward
CNT30355032Malus domestica goldenLactuca sativa39.9627.2682.06223forward
CNT30329515Malus domestica goldenDioscorea rotundata38.8928.481.11217forward
CNT30724403Malus domestica goldenLupinus angustifolius29.3944.3287.2164forward

Expression of CNT30715236

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MGDAVDGTKDISVVALHAGMKGYCNAALV*

>peptide 2 (32 aa)
MLNLINHFIPSVVVAARRLRFELYAEMRKDKRE

Sequence

>CNT30715236
GGAAGTAACGGATAACATTGGCAGTGTTCCCTCTCCACAATGAACCAAAACCCTCTTCCTTGATTGTACGGCTAAAGCACTCCCCAATGCCCTTGTAGGG
TTGAGACAAACGACCAGTTTTGATCATCTCATCCTGGTTTTGAATCAACAGCTTGACACGCTCAATTGGGGCAGCAGCAGTTTTAGACACAGCAGCAGAG
ACTCCACCCATGAGAAAATCAATCAGAAAGTGGCCTTTCTCTGCAGGGGCTTGAACAAAGATGGGAGATGCAGTTGATGGAACCAAAGACATATCAGTGG
TAGCCCTGCATGCTGGCATGAAGGGATACTGCAATGCAGCATTAGTGTAGTTCCCATATGCACGTCTTTGGTACATCCCTGGTCTTTGGAAGCCATTATC
GTAACCCTGGATAGATTGCTGAAGGAGCTGGCCAGCTACCTTCTGGACGACAGAAGGATGTTGAACCTGATCAACCATTTCATACCTTCGGTGGTGGTGG
CTGCGAGGCGTCTCCGCTTTGAACTCTACGCTGAAATGCGCAAAGACAAAAGAGAGAC